Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 613
Gene Symbol: BCR
BCR
0.040 Biomarker group BEFREE Ph negative CML represents a heterogeneous group of myeloproliferative/myelodysplastic disorders. 3279513 1988
Entrez Id: 4826
Gene Symbol: NNAT
NNAT
0.010 Biomarker group BEFREE NNAT maps to 20q11.2-q12, a region exhibiting loss of heterozygosity in acute myeloid leukemia and myelodysplastic/myeloproliferative disease. 11960906 2002
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.040 Biomarker group BEFREE The BCR-ABL-negative chronic myeloproliferative disorders (CMPD) and myelodysplastic/myeloproliferative diseases (MDS/MPD) are a spectrum of related conditions for which the molecular pathogenesis is poorly understood. 12542482 2003
Entrez Id: 4914
Gene Symbol: NTRK1
NTRK1
0.010 AlteredExpression group BEFREE PDGFRB, a transmembrane tyrosine kinase receptor for platelet-derived growth factor, is constitutively activated by gene fusion with different partners in myeloproliferative/myelodysplastic disorders with peculiar clinical characteristics. 15087372 2004
Entrez Id: 5159
Gene Symbol: PDGFRB
PDGFRB
0.010 AlteredExpression group BEFREE PDGFRB, a transmembrane tyrosine kinase receptor for platelet-derived growth factor, is constitutively activated by gene fusion with different partners in myeloproliferative/myelodysplastic disorders with peculiar clinical characteristics. 15087372 2004
Entrez Id: 11083
Gene Symbol: DIDO1
DIDO1
0.200 Biomarker group MGD Dido gene expression alterations are implicated in the induction of hematological myeloid neoplasms. 16127461 2005
Entrez Id: 613
Gene Symbol: BCR
BCR
0.040 Biomarker group BEFREE Atypical CML should therefore be considered as a JAK2 negative chronic myeloid neoplasm that remains properly categorized, alongside chronic myelomonocytic leukemia and juvenile myelomonocytic leukemia, within the WHO group of myelodysplastic/myeloproliferative neoplasms. 18555525 2008
Entrez Id: 3717
Gene Symbol: JAK2
JAK2
0.040 Biomarker group BEFREE Atypical CML should therefore be considered as a JAK2 negative chronic myeloid neoplasm that remains properly categorized, alongside chronic myelomonocytic leukemia and juvenile myelomonocytic leukemia, within the WHO group of myelodysplastic/myeloproliferative neoplasms. 18555525 2008
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.030 GeneticVariation group BEFREE Loss of heterozygosity 4q24 and TET2 mutations associated with myelodysplastic/myeloproliferative neoplasms. 19372255 2009
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.310 Biomarker group CTD_human Screening of a total of 614 individuals with myeloid disorders revealed 49 monoallelic or biallelic EZH2 mutations in 42 individuals; the mutations were found most commonly in those with myelodysplastic/myeloproliferative neoplasms (27 out of 219 individuals, or 12%) and in those with myelofibrosis (4 out of 30 individuals, or 13%). 20601953 2010
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.020 GeneticVariation group BEFREE A further mutation screen of 187 patients with myelodysplastic/myeloproliferative neoplasms identified RUNX1 mutations in 27 (14%) and CEBPA mutations in seven (4%) patients. 20421268 2010
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.010 GeneticVariation group BEFREE Analysis of other transcription factors known to be frequently mutated in acute myeloid leukemia revealed NPM1 mutations in six (3%) and WT1 mutations in two (1%) patients with myelodysplastic/myeloproliferative neoplasms. 20421268 2010
Entrez Id: 1050
Gene Symbol: CEBPA
CEBPA
0.010 GeneticVariation group BEFREE A further mutation screen of 187 patients with myelodysplastic/myeloproliferative neoplasms identified RUNX1 mutations in 27 (14%) and CEBPA mutations in seven (4%) patients. 20421268 2010
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
0.010 Biomarker group BEFREE JMML and CMML are rare myelodysplastic/myeloproliferative neoplasms occurring at both ends of life. 20955399 2010
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.070 GeneticVariation group BEFREE Clinical significance of SF3B1 mutations in myelodysplastic syndromes and myelodysplastic/myeloproliferative neoplasms. 21998214 2011
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.040 Biomarker group BEFREE The microRNA/miR deregulation in BCR-ABL-negative myelodysplastic-myeloproliferative neoplasms (MDS/MPN) is not known. 20842500 2011
Entrez Id: 3717
Gene Symbol: JAK2
JAK2
0.040 GeneticVariation group BEFREE Association of JAK2 mutation status and cytogenetic abnormalities in myeloproliferative neoplasms and myelodysplastic/myeloproliferative neoplasms. 21502425 2011
Entrez Id: 3164
Gene Symbol: NR4A1
NR4A1
0.020 Biomarker group BEFREE Here we show that reduced gene dosage of NR4A1 and NR4A3 in hypoallelic (NR4A1(+/-)NR4A3(-/-) or NR4A1(-/-)NR4A3(+/-)) mice below a critical threshold leads to a chronic myeloid malignancy that closely recapitulates the pathologic features of mixed myelodysplastic/myeloproliferative neoplasms (MDS/MPNs) with progression to AML in rare cases. 21205929 2011
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.020 GeneticVariation group BEFREE RUNX1 mutations have also been detected with high frequency in minimally differentiated AML M0 subtypes and myelodysplastic/myeloproliferative neoplasms. 21268063 2011
Entrez Id: 8013
Gene Symbol: NR4A3
NR4A3
0.020 Biomarker group BEFREE Here we show that reduced gene dosage of NR4A1 and NR4A3 in hypoallelic (NR4A1(+/-)NR4A3(-/-) or NR4A1(-/-)NR4A3(+/-)) mice below a critical threshold leads to a chronic myeloid malignancy that closely recapitulates the pathologic features of mixed myelodysplastic/myeloproliferative neoplasms (MDS/MPNs) with progression to AML in rare cases. 21205929 2011
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.040 Biomarker group BEFREE We investigated 15,542 patients with suspected BCR-ABL1- negative myeloproliferative or myelodysplastic/myeloproliferative neoplasm (including 359 chronic myelomonocytic leukemia) by a molecular marker set. 22511494 2012
Entrez Id: 867
Gene Symbol: CBL
CBL
0.020 GeneticVariation group BEFREE Three-year survival rate was 27%, possibly indicating poor prognosis of CBL mutated MDS/MPN patients. 23010802 2012
Entrez Id: 867
Gene Symbol: CBL
CBL
0.020 Biomarker group BEFREE CBL(mut) were more frequent in myelodysplastic/myeloproliferative neoplasms than myeloproliferative neoplasms (51 of 328, 15.5% vs. 12 of 291, 4.1%; P<0.001). 22733026 2012
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.070 GeneticVariation group BEFREE In 2011, whole-exome sequencing studies showed recurrent somatic mutations of SF3B1 and other genes of the RNA splicing machinery in patients with myelodysplastic syndrome or myelodysplastic/myeloproliferative neoplasm. 23160465 2013
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.070 GeneticVariation group BEFREE Refractory anemia with ring sideroblasts (RARS-T) associated with marked thrombocytosis is a myelodysplastic/myeloproliferative neoplasm associated with both SF3B1 and JAK2 or MPL mutations. 24507814 2013