Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 92
Gene Symbol: ACVR2A
ACVR2A
0.010 Biomarker disease BEFREE 5-ASA increases replication fidelity in mononucleotide, dinucleotide, and tetranucleotide repeats and reduces mutations in tumor suppressor genes TGFBR2 and ACVR2, a finding that may provoke in vivo studies for the prevention of colorectal cancer in hereditary nonpolyposis colorectal cancer. 20197483 2010
Entrez Id: 9049
Gene Symbol: AIP
AIP
0.010 GeneticVariation disease BEFREE AIP IHC, followed by genetic counseling and possible AIP mutation analysis in IHC-negative cases, a procedure similar to the diagnostics of the Lynch syndrome, appears feasible in identification of PAP. 17360484 2007
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 Biomarker disease BEFREE Though HNPCC-associated colorectal cancers show simple genetic profiles with few chromosomal alterations, we demonstrate frequent and repeated targeting of the PI3K/AKT/mTOR pathway, which suggests that therapeutic strategies directed at this pathway are likely to be beneficial also in HNPCC. 19731079 2010
Entrez Id: 238
Gene Symbol: ALK
ALK
0.010 Biomarker disease BEFREE Many oncologists reported having no patients with CRC who had mismatch repair and/or microsatellite instability (24%) or germline Lynch syndrome (32%) testing, and no patients with NSCLC who had ALK testing (11%). 28095174 2017
Entrez Id: 11199
Gene Symbol: ANXA10
ANXA10
0.010 AlteredExpression disease BEFREE As these polyps give rise to the majority of sporadic microsatellite-unstable tumors, we evaluated the ability of annexin A10 expression to discriminate between LS and sporadic tumors. 24625416 2014
Entrez Id: 320
Gene Symbol: APBA1
APBA1
0.010 Biomarker disease BEFREE Methylation of MINTs 1, 2, 12 and 31 occurred in 4% of analyses for HNPCC tumours contrasted with 73% for sporadic MSI-H tumours (P < 0.001). 15340260 2004
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE We asked whether in Lynch syndrome biallelic inactivation of MMR genes occurred at a similar frequency to that of APC gene, and whether MMR inactivation resulted in detectable lesions within the intestinal mucosa. 22552011 2012
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE Furthermore, five markers (BAT25, BAT26, D2S123, APC, and D17S250) of the Bethesda consensus panel for detection of colorectal cancer within the hereditary non-polyposis colon cancer syndrome (HNPCC) were analyzed. 16762487 2006
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE Similarities with HNPCC high-microsatellite instability tumors are observed when APC data are analyzed. 17908962 2007
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE It is well known that germ line mutations in the cis-element of tumor suppressor genes such as mismatch repair (MMR) genes, the adenomatous polyposis coli (APC) gene and the E-cadherin (CDH1) gene are involved in Lynch syndrome, familial adenomatous polyposis and hereditary diffuse gastric cancer, respectively. 21134075 2011
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Our previous study detected a low frequency of APC gene mutation (21%) in colorectal tumors from HNPCC patients, in contrast to a high frequency of APC gene alteration (>70%) in non-HNPCC tumors. 10493496 1999
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE However, ZEB1 is not expressed in the epithelium of hereditary forms of CRCs that carry wild-type APC and where β-catenin is excluded from the nucleus (Lynch syndrome). 22080605 2011
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE APC, p53, and K-ras-2 mutations and loss of heterozygosity of tumor-suppressor genes were significantly less frequent (P = 0.03 to 0.0006) but transforming growth factor beta type II receptor mutation was significantly more frequent (P = 0.000001) in HNPCC than in non-HNPCC. 8690195 1996
Entrez Id: 324
Gene Symbol: APC
APC
0.400 AlteredExpression disease BEFREE We found a significant difference in cytoplasmic APC expression frequency between sporadic MSS (52%) and HNPCC tumors (78%), whereas no difference was detected between MSI-H and MSS or HNPCC tumors. 20532534 2010
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Germ-line mutations in the adenomatous polyposis coli (APC) gene characteristic of familial adenomatous polyposis were evaluated, as well as DNA replication errors and germline mutations in nucleotide mismatch-repair genes characteristic of hereditary nonpolyposis colorectal cancer. 7661930 1995
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE The genes responsible for each disease were identified almost two decades ago -APC for FAP and the MMR genes for HNPCC - and a large number of germline variations have been identified in these genes in hereditary cancer patients. 19766128 2010
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE This may be because Lynch Syndrome cancers commonly arise in colorectal adenomas already bearing the APC mutation, whereas sporadic microsatellite unstable colorectal cancers arise from serrated polyps typically lacking APC mutation, decreasing the selection pressure on other WNT signaling related loci in Lynch syndrome. 28573495 2018
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE The discipline of molecular genetics has identified germline mutations that include APC in familial adenomatous polyposis (FAP) and mutator genes, namely MSH2, MLH1, PMS1, and PMS2 in hereditary nonpolyposis colorectal cancer (HNPCC). 9062584 1997
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE These results indicate that germline ASE analysis and screening for APC and MUTYH defects should be included in HNPCC diagnostic algorithms. 24278394 2013
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Two familial forms of colorectal cancer (CRC), Lynch syndrome (LS) and familial adenomatous polyposis (FAP), are caused by rare mutations in DNA mismatch repair genes (MLH1, MSH2, MSH6, PMS2) and the genes APC and MUTYH, respectively. 30324682 2018
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Many cases of HNPCC are due to germline mutations in DNA mismatch repair genes, leading to the tumor phenotype of microsatellite instability (MSI), and most cases of FAP are caused by germline APC mutations. 11135435 2001
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE APC gene mutations and Lynch syndrome were excluded in the relevant cases according to accepted clinical criteria. 25822476 2015
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker disease BEFREE The APC gene on chromosome 5 causing adenomatous polyposis coli represents a minority of the inherited colon cancer cases, while hereditary-non polyposis colon cancer (HNPCC) may cause five percent of all human colon cancer. 7903889 1993
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Data did not support linkage to the APC locus or to any of the loci for hereditary nonpolyposis colorectal cancer. 8644741 1996
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation disease BEFREE Complete or partial gene deletions were identified in seven cases for hMSH2 (5.7% of mutation-negative HNPCC; 4.3% of all HNPCC), no cases for hMLH1 and six cases for APC (25% of mutation negative FAP; 8% of all FAP). 15475941 2004