Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7012
Gene Symbol: TERC
TERC
0.580 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is an incurable complex genetic disorder that is associated with sequence changes in 7 genes (MUC5B, TERT, TERC, RTEL1, PARN, SFTPC, and SFTPA2) and with variants in at least 11 novel loci. 27630174 2016
Entrez Id: 51750
Gene Symbol: RTEL1
RTEL1
0.630 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is an incurable complex genetic disorder that is associated with sequence changes in 7 genes (MUC5B, TERT, TERC, RTEL1, PARN, SFTPC, and SFTPA2) and with variants in at least 11 novel loci. 27630174 2016
Entrez Id: 5073
Gene Symbol: PARN
PARN
0.550 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is an incurable complex genetic disorder that is associated with sequence changes in 7 genes (MUC5B, TERT, TERC, RTEL1, PARN, SFTPC, and SFTPA2) and with variants in at least 11 novel loci. 27630174 2016
Entrez Id: 6440
Gene Symbol: SFTPC
SFTPC
0.600 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is an incurable complex genetic disorder that is associated with sequence changes in 7 genes (MUC5B, TERT, TERC, RTEL1, PARN, SFTPC, and SFTPA2) and with variants in at least 11 novel loci. 27630174 2016
Entrez Id: 729238
Gene Symbol: SFTPA2
SFTPA2
0.740 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is an incurable complex genetic disorder that is associated with sequence changes in 7 genes (MUC5B, TERT, TERC, RTEL1, PARN, SFTPC, and SFTPA2) and with variants in at least 11 novel loci. 27630174 2016
Entrez Id: 2720
Gene Symbol: GLB1
GLB1
0.010 AlteredExpression disease BEFREE IPF hLFs have increased cellular senescence with higher expression of β-galactosidase, p21, p16, p53, and cytokines related to the senescence-associated secretory phenotype (SASP) as well as decreased proliferation/apoptosis compared with age-matched controls. 28860144 2017
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.100 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is characterized by accumulation of extracellular matrix (ECM) proteins and fibroblast proliferation. 29053339 2018
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.100 Biomarker disease BEFREE IPF is characterized primarily by excessive deposition of extracellular matrix (ECM) proteins by activated lung fibroblasts and myofibroblasts, resulting in reduced gas exchange and impaired pulmonary function. 30130563 2019
Entrez Id: 1666
Gene Symbol: DECR1
DECR1
0.040 Biomarker disease BEFREE IPF sera-induced cellular effects were significantly blunted in cells exposed to the NADPH oxidase inhibitor diphenyleneiodonium (DPI) proving the causative role of ROS and suggesting their potential cellular source. 30420906 2018
Entrez Id: 406936
Gene Symbol: MIR144
MIR144
0.010 AlteredExpression disease BEFREE IPF lung fibroblasts transfected with anti-miR-144-3p had increased RXFP1 expression and reduced α-SMA expression. 30709904 2019
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.100 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is a chronic disease characterized by the pathological remodeling of air sacs as a result of excessive accumulation of extracellular matrix (ECM) proteins, but the mechanism governing the robust protein expression is poorly understood. 31488543 2019
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.100 Biomarker disease BEFREE Idiopathic pulmonary fibrosis (IPF) is a progressive lung disease with a poor prognosis and limited therapies, and transforming growth factor-β1 (TGF-β1) plays a central role in the pathogenesis of IPF. 31606345 2019
Entrez Id: 3371
Gene Symbol: TNC
TNC
0.030 AlteredExpression disease BEFREE Tenascin mRNA expression at the foci of recent injury in usual interstitial pneumonia. 10712350 2000
Entrez Id: 7079
Gene Symbol: TIMP4
TIMP4
0.010 AlteredExpression disease BEFREE TIMP-4 was expressed in IPF lungs by epithelial and plasma cells. 10956632 2000
Entrez Id: 6362
Gene Symbol: CCL18
CCL18
0.030 AlteredExpression disease BEFREE CCL18 expression was significantly increased in lungs affected by HP in comparison with lungs affected by IPF (2,085+/-393 vs. 1,023+/-110; P<0.05) and controls (2,085+/-393 vs. 467+/-94; P<0.01). 11590198 2001
Entrez Id: 5054
Gene Symbol: SERPINE1
SERPINE1
0.060 GeneticVariation disease BEFREE PAI-1 promoter genotype was determined in 88 well-characterized patients with idiopathic interstitial pneumonia consisting of 62 patients with usual interstitial pneumonia and 26 with nonspecific interstitial pneumonia. 12765340 2003
Entrez Id: 4512
Gene Symbol: COX1
COX1
0.020 AlteredExpression disease BEFREE Cox-1 and Cox-2 expression were determined using RT-competitive PCR and immunohistochemistry in pulmonary biopsies from IPF (n = 22), chronic obstructive pulmonary disease (COPD) (n = 13), and lung tissue from subjects undergoing pleurodesis for spontaneous pneumothorax (control group, n = 17). 15127973 2004
Entrez Id: 5742
Gene Symbol: PTGS1
PTGS1
0.020 AlteredExpression disease BEFREE Cox-1 and Cox-2 expression were determined using RT-competitive PCR and immunohistochemistry in pulmonary biopsies from IPF (n = 22), chronic obstructive pulmonary disease (COPD) (n = 13), and lung tissue from subjects undergoing pleurodesis for spontaneous pneumothorax (control group, n = 17). 15127973 2004
Entrez Id: 3486
Gene Symbol: IGFBP3
IGFBP3
0.020 AlteredExpression disease BEFREE IGFBP-3 and -5 levels were increased in vivo in IPF lung tissues and in vitro in fibroblasts cultured from IPF lung. 15681824 2005
Entrez Id: 6440
Gene Symbol: SFTPC
SFTPC
0.600 GeneticVariation disease BEFREE Surfactant protein C gene variations have not, however, been associated with sporadic cases, i.e. idiopathic pulmonary fibrosis (IPF). 15863652 2005
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.040 Biomarker disease BEFREE Osteopontin was localized to alveolar epithelial cells in IPF lungs and was also significantly elevated in bronchoalveolar lavage from IPF patients. 16128620 2005
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE Cyclin D1 expression was compared in primary IPF patient-derived fibroblasts and equivalent normal control cells. 16776827 2006
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 AlteredExpression disease BEFREE VEGF is expressed in several parts of the lung and the pleura while it has been shown that changes in its expression play a significant role in the pathophysiology of some of the most common respiratory disorders, such as acute lung injury, asthma, chronic obstructive pulmonary disease, obstructive sleep apnea, idiopathic pulmonary fibrosis, pulmonary hypertension, pleural disease, and lung cancer. 17044926 2006
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.010 AlteredExpression disease BEFREE CCR7 was expressed by IPF/UIP fibroblasts, but not normal fibroblasts. 17331965 2007
Entrez Id: 4827
Gene Symbol: NM
NM
0.010 Biomarker disease BEFREE Neutrophil migration into the airspaces of the lung is thought to contribute to the alveolar damage and subsequent fibrosis in idiopathic pulmonary fibrosis (IPF). 1752942 1991