Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 Biomarker disease GENOMICS_ENGLAND Overall, these results identify PHF6 as a new X-linked tumor suppressor in T-ALL and point to a strong genetic interaction between PHF6 loss and aberrant expression of TLX transcription factors in the pathogenesis of this disease. 20228800 2010
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Our data suggest that PHF6 mutation might play a role in tumorigenesis not only of T-ALL, but also of AML and HCC. 21736506 2012
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 AlteredExpression disease BEFREE We selected miR-128-3p as a candidate PHF6-targeting, oncogenic microRNA and demonstrated regulation of PHF6 expression upon modulation of this microRNA in T-cell acute lymphoblastic leukemia cell lines. 24895337 2014
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE This proposed diagnostic group is supported by (i) retained myeloid differentiation potential during early T cell lymphoid development, (ii) recognition that some cases of acute myeloid leukaemia (AML) harbour hallmarks of T cell development, such as T-cell receptor gene rearrangements and (iii) common gene mutations in subsets of AML and T cell acute lymphoblastic leukaemia (T-ALL), including WT1, PHF6, RUNX1 and BCL11B. 29441563 2018
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Analysis of the mutational genotype of adult T-ALL revealed a positive correlation between PTPN2 deletions and gain-of-function alterations in the IL7R/JAK-STAT signaling pathway as well as PHF6 and WT1 mutations. 31270080 2019
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Mutations in the PHF6 gene have also been associated with T-cell acute lymphoblastic leukemia and acute myeloid leukemia. 24554700 2014
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 CausalMutation disease CGI
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Loss of function mutations and deletions encompassing the plant homeodomain finger 6 (PHF6) gene are present in about 20% of T-cell acute lymphoblastic leukemias (ALLs). 21030981 2011
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 Biomarker disease BEFREE The depletion of PHF6 decreases the drug sensitivity of T-cell acute lymphoblastic leukemia to prednisolone. 30551478 2019
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 Biomarker disease CTD_human Overall, these results identify PHF6 as a new X-linked tumor suppressor in T-ALL and point to a strong genetic interaction between PHF6 loss and aberrant expression of TLX transcription factors in the pathogenesis of this disease. 20228800 2010
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Our observation indicates that BFLS may represent a cancer predisposition syndrome and that mutations of PHF6 contribute to T-ALL. 20806366 2010
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 GeneticVariation disease BEFREE Although PHF6 is X-linked and mutations have been reported to occur almost exclusively in male patients, we found no sex difference in the incidences of PHF6 mutations in Chinese patients with T-cell acute lymphoblastic leukemia. 21880637 2011
Entrez Id: 84295
Gene Symbol: PHF6
PHF6
0.700 Biomarker disease BEFREE Overall, these results identify PHF6 as a new X-linked tumor suppressor in T-ALL and point to a strong genetic interaction between PHF6 loss and aberrant expression of TLX transcription factors in the pathogenesis of this disease. 20228800 2010
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 Biomarker disease CTD_human We identify CNOT3 as a tumor suppressor mutated in 7 of 89 (7.9%) adult T-ALLs, and its knockdown causes tumors in a sensitized Drosophila melanogaster model. 23263491 2013
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 CausalMutation disease CGI
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 GeneticVariation disease BEFREE For example, mutation in CNOT3, a gene coding for CNOT3 subunit of the CCR4-NOT complex, is found to be associated with T-cell acute lymphoblastic leukemia, T-ALL, though its contribution to other cancers has not been reported. 30531840 2019
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 GeneticVariation disease BEFREE We recently identified CNOT3 loss-of-function mutations in patients with T-cell acute lymphoblastic leukemia (T-ALL). 30144809 2018
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 GeneticVariation disease BEFREE Of interest, besides CNOT6 down-regulation, these cases also showed low BTG1 expression and a high incidence of CNOT3 mutations, suggesting that the CCR4-NOT complex plays a crucial role in the pathogenesis of HOXA-positive T-cell acute lymphoblastic leukemia with terminal 5q deletions. 27151989 2016
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 GeneticVariation disease BEFREE We identify CNOT3 as a tumor suppressor mutated in 7 of 89 (7.9%) adult T-ALLs, and its knockdown causes tumors in a sensitized Drosophila melanogaster model. 23263491 2013
Entrez Id: 4849
Gene Symbol: CNOT3
CNOT3
0.640 SomaticCausalMutation disease ORPHANET We identify CNOT3 as a tumor suppressor mutated in 7 of 89 (7.9%) adult T-ALLs, and its knockdown causes tumors in a sensitized Drosophila melanogaster model. 23263491 2013
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.600 Biomarker disease BEFREE SIL-TAL1 fusion gene negative impact in T-cell acute lymphoblastic leukemia outcome. 19562638 2009
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.600 GeneticVariation disease BEFREE Frequency and DNA sequence of tal-1 rearrangement in children with T-cell acute lymphoblastic leukemia. 1637887 1992
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.600 Biomarker disease BEFREE Genetic deletion of CXCR4 in murine hematopoietic progenitors abrogated leukemogenesis induced by constitutively active Notch1, whereas lack of CCR6 and CCR7, which have been shown to be involved in T cell and leukemia extravasation into the central nervous system, respectively, did not influence T cell acute lymphoblastic leukemia development. 26931577 2016
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.600 GeneticVariation disease BEFREE The SIL (SCL interrupting locus) gene was initially discovered at the site of a genomic rearrangement in a T-cell acute lymphoblastic leukemia cell line. 1922059 1991
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.600 GeneticVariation disease BEFREE We have established a mouse CD4+CD8+ double positive T-cell line (named MOHITO, for MOuse Hematopoietic Interleukin-dependent cell line of T-cell Origin) that has many features of human T-cell acute lymphoblastic leukemia (Notch1 and Jak1 mutation, TCR rearrangement) and is dependent on interleukin-7. 21193420 2011