Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 930
Gene Symbol: CD19
CD19
0.010 Biomarker disease BEFREE These enhanced CD19 ECDs significantly increase, and in some cases recover, fusion protein expression while maintaining target antigen affinity. 31242389 2019
Entrez Id: 5580
Gene Symbol: PRKCD
PRKCD
0.010 Biomarker disease BEFREE Scopus, Web of Science, and PubMed were searched from database inception to May 1, 2018 for articles reporting skull base ECD. 30828728 2019
Entrez Id: 5130
Gene Symbol: PCYT1A
PCYT1A
0.010 Biomarker disease BEFREE The patient underwent radiological examinations, including <sup>18</sup> F-fluorodeoxyglucose (FDG)-positron emission tomography/computed tomography (PET/CT), bone scintigraphy and CT. A biopsy from the lesion with the highest FDG accumulation confirmed the presence of foamy macrophages, a diagnostic clue for ECD. 29603831 2018
Entrez Id: 3068
Gene Symbol: HDGF
HDGF
0.010 Biomarker disease BEFREE In the following, four hub genes which were USP7, hepatoma-derived growth factor, EP300, and split hand/foot malformation type 1 (SHFM1) were screened out.None of them was DEGs. 29970661 2018
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 AlteredExpression disease BEFREE We found a marked increase in CCL18 but not TGF-β1 levels in serum and lesions of ECD patients (<i>p < 0.001</i>), independently of treatment status and consistently over time. 29900045 2018
Entrez Id: 6362
Gene Symbol: CCL18
CCL18
0.010 Biomarker disease BEFREE These findings suggest the involvement of CCL18-induced fibrosis in ECD pathogenesis, providing a rationale for exploring CCL18 inhibition as a treatment for progressive fibrosis in ECD. 29900045 2018
Entrez Id: 2033
Gene Symbol: EP300
EP300
0.010 Biomarker disease BEFREE In the following, four hub genes which were USP7, hepatoma-derived growth factor, EP300, and split hand/foot malformation type 1 (SHFM1) were screened out.None of them was DEGs. 29970661 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.010 AlteredExpression disease BEFREE ECD significantly increased the expression of mitochondria-dependent apoptotic pathway-related genes after 48h; we observed significantly (p≤0.05) increased expression of CYP1A, GPX, GSK3β and TNF-α and downregulated expression of NF-κB. 28068628 2017
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker disease BEFREE IL-6 emerges as a central mediator in ECD pathogenesis. 28680751 2017
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.010 GeneticVariation disease BEFREE De novo IGF2 mutation on the paternal allele in a patient with Silver-Russell syndrome and ectrodactyly. 28489339 2017
Entrez Id: 51230
Gene Symbol: PHF20
PHF20
0.010 Biomarker disease BEFREE Higher cell affinity was observed on NANOZR-E when compared with ECD treated 3Y-TZP. 27783470 2017
Entrez Id: 6098
Gene Symbol: ROS1
ROS1
0.010 Biomarker disease BEFREE ECD significantly triggered intracellular ROS generation even from the lower doses of 0.6 and 1.2μM; and it is relative to higher dose of 2.4μM. 28068628 2017
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.010 GeneticVariation disease BEFREE This is the first report of mutations in a human disease with ectrodactyly with pulmonary acinar dysplasia and, as such, homozygous loss-of-function FGFR2 mutations represent a unique syndrome. 27323706 2016
Entrez Id: 3730
Gene Symbol: ANOS1
ANOS1
0.010 AlteredExpression disease BEFREE Additionally, a literature review allowed us to conclude that KAL1 protein at high levels may interfere with FGFR1 signaling activity, most probably indirectly giving rise to ectrodactyly, intellectual disability, and genital anomalies. 25339597 2015
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.010 Biomarker disease BEFREE IFN-α seems to be the best initial treatment for ECD. 26197238 2015
Entrez Id: 51266
Gene Symbol: CLEC1B
CLEC1B
0.010 Biomarker disease BEFREE Furthermore, Fc-CLEC2(ECD) treatment improves cytokine profiles and increases both the M2 macrophage population and the genes involved in the oxidation of lipid metabolism in the liver. 26151067 2015
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 AlteredExpression disease BEFREE Increased expression of PD-L1 (≥2+/≥5%) was seen in 3/4 ECD, 7/8 LCH, 3/3 FDCS and 1/1 HS, with overall 81% concordance between 2 antibodies used in the study (SP142 vs. MAB1561 clone). 26110571 2015
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.010 Biomarker disease BEFREE IFN-α seems to be the best initial treatment for ECD. 26197238 2015
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation disease BEFREE There was 100% concordance between tissue and urinary cfDNA genotype in treatment-naïve samples. cfDNA analysis facilitated identification of previously undescribed KRAS(G12S)-mutant ECD and dynamically tracked disease burden in patients treated with a variety of therapies. 25324352 2015
Entrez Id: 5905
Gene Symbol: RANGAP1
RANGAP1
0.010 GeneticVariation disease BEFREE Data shown here provides further evidence for the contribution of DLX5 point mutations to the development of ectrodactyly and suggest the possibility of sex-related segregation distortion with an excess of affected males. 25196357 2014
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 Biomarker disease BEFREE In this issue of Blood, the findings of Chakraborty et al and Emile et al support a model in which the mitogen-activated protein kinase (MAPK) and PI3K/AKT pathways are critical in the pathogenesis of 2 of the most common histiocytoses—Langerhans cell histiocytosis (LCH) and Erdheim-Chester disease (ECD)—whereas their respective mutational profiles demonstrate important similarities and differences. 25377560 2014
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.010 GeneticVariation disease BEFREE FGFR1 mutations cause Hartsfield syndrome, the unique association of holoprosencephaly and ectrodactyly. 23812909 2013
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 GeneticVariation disease BEFREE Despite the fact that CdCl(2) induced both p53-dependent (in the mesenchyme) and p53-independent (in the AER) cell death in the developing limb bud, CdCl(2)-induced ectrodactyly was independent of the p53 gene dosage at the studied time point. 20213698 2010
Entrez Id: 22853
Gene Symbol: LMTK2
LMTK2
0.010 Biomarker disease BEFREE LMTK2 appeared to be a potential candidate gene for SHFM1, but no LMTK2 mutations were found in 29 individuals with SHFM. 19449426 2009
Entrez Id: 51141
Gene Symbol: INSIG2
INSIG2
0.010 GeneticVariation disease BEFREE The second breakpoint associated with holoprosencephaly, hypertelorism and ectrodactyly syndrome was mapped 2.5 Mb proximal at 118.4 Mb and the candidate genes identified from this region were the insulin-induced protein 2 and the homeobox protein engrailed-1. 19223936 2009