Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.020 GeneticVariation disease BEFREE We investigate a variant in the gene encoding growth factor BMP4 in a family with Stickler syndrome with associated renal dysplasia. 30568244 2019
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.020 AlteredExpression disease BEFREE These findings suggest that matrilysin expression in RD may be an injury response that disrupts normal nephrogenesis by impairing BMP-7 signaling. 22215634 2012
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.020 AlteredExpression disease BEFREE Our findings demonstrate that the overexpression of β-catenin in stromal cells is sufficient to cause renal dysplasia. 26956838 2016
Entrez Id: 655
Gene Symbol: BMP7
BMP7
0.020 Biomarker disease BEFREE Expression of genes known to be essential for normal kidney development, such as WT1, BMP7, renin, angiotensin receptor 2 (AGTR2), SAL-like 1 (SALL1) and glypican 3 (GPC3), were decreased in dysplastic kidneys. 17450386 2007
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.020 Biomarker disease BEFREE Expression of selected gene products (BMP7, renin, and MMP7) was further confirmed in parallel sections and in several normal and human dysplastic kidneys, supporting the role of these genes as putative RD biomarkers. 17450386 2007
Entrez Id: 23216
Gene Symbol: TBC1D1
TBC1D1
0.010 GeneticVariation disease BEFREE Significantly reduced Glut4 levels were detected in kidneys of Tbc1d1 (-/-) mice and the dysplastic kidney of a TBC1D1 mutation carrier versus controls. 26572137 2016
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.010 Biomarker disease BEFREE Markedly increased expression of HGF receptor, c-Met tyrosine kinase in renal dysplasia suggests that HGF may be involved in the development of renal dysplasia. 12750986 2003
Entrez Id: 55278
Gene Symbol: QRSL1
QRSL1
0.010 GeneticVariation disease BEFREE The hypoparathyroidism, deafness, and renal dysplasia (HDR) syndrome is an autosomal dominant disorder caused by mutations of a member of the GATA-binding family of transcription factors, GATA3. 15705923 2005
Entrez Id: 182
Gene Symbol: JAG1
JAG1
0.010 Biomarker disease BEFREE The role of NOTCH2 and JAG1 in formation of proximal nephron structures and podocytes might explain the observed phenotypes of renal dysplasia and proteinuria in patients with Alagille syndrome, and renal tubular acidosis may be the result of JAG1 expression in the collecting ducts. 23752887 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE The present case showed severe intellectual disability, impaired awareness, hyperekplexia, involuntary movements, early onset refractory seizures, and delayed myelination on brain magnetic resonance imaging as well as a polycystic and dysplastic kidney, which are previously unreported anomalies in CFC or RAS/mitogen-activated protein kinase syndromes related to BRAF variant. 30842599 2019
Entrez Id: 7403
Gene Symbol: KDM6A
KDM6A
0.010 Biomarker disease BEFREE We observed a high frequency of somatic mutations in chromatin modifiers, particularly KDM6A, in AA-UTUC, demonstrated the sufficiency of AA to induce renal dysplasia in mice, and reproduced the AA mutational signature in experimentally treated human renal tubular cells. 23926199 2013
Entrez Id: 324
Gene Symbol: APC
APC
0.010 GeneticVariation disease BEFREE We observed a complete reversion of FAP phenotype in a male teenager carrying a germline mutation in APC gene who underwent a kidney transplant due to end-stage kidney disease secondary to congenital dysplastic kidneys. 28551651 2017
Entrez Id: 1602
Gene Symbol: DACH1
DACH1
0.010 GeneticVariation disease BEFREE Here, we present a patient with renal dysplasia carrying homozygous missense mutations in both BMP4 (p.N150K) and DACH1 (p.R684C). 23262432 2013
Entrez Id: 4284
Gene Symbol: MIP
MIP
0.010 AlteredExpression disease BEFREE Eleven dysplastic kidneys showed no expression of LIM1. 21778788 2011
Entrez Id: 65109
Gene Symbol: UPF3B
UPF3B
0.010 GeneticVariation disease BEFREE Broadening the phenotype associated with mutations in UPF3B: two further cases with renal dysplasia and variable developmental delay. 22609145 2012
Entrez Id: 5979
Gene Symbol: RET
RET
0.010 GeneticVariation disease BEFREE We report what we believe to be the first case of a patient with multiple endocrine neoplasia type 2A (MEN 2A) and renal dysplasia associated with an RET 634 mutation. 12606135 2003
Entrez Id: 3258
Gene Symbol: HPT
HPT
0.010 Biomarker disease BEFREE Hypoparathyroidism with sensorineural deafness and renal dysplasia (HDR) syndrome is an autosomal dominant condition caused by mutations of the gene encoding the dual zinc-finger transcription factor, GATA3. 29593425 2018
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.010 Biomarker disease BEFREE Expression of genes known to be essential for normal kidney development, such as WT1, BMP7, renin, angiotensin receptor 2 (AGTR2), SAL-like 1 (SALL1) and glypican 3 (GPC3), were decreased in dysplastic kidneys. 17450386 2007
Entrez Id: 54796
Gene Symbol: BNC2
BNC2
0.010 Biomarker disease BEFREE Congenital bladder neck obstruction (or lower urinary tract obstruction [LUTO]) describes a heterogeneous group of congenital anomalies presenting with similar prenatal ultrasonographic findings of dilated posterior urethra, megacystis, hydronephrosis, oligohydramnios and often with associated renal dysplasia. 30819578 2019
Entrez Id: 3975
Gene Symbol: LHX1
LHX1
0.010 AlteredExpression disease BEFREE Eleven dysplastic kidneys showed no expression of LIM1. 21778788 2011
Entrez Id: 2908
Gene Symbol: NR3C1
NR3C1
0.010 Biomarker disease BEFREE Finally, both glucocorticoid receptor and indian hedgehog proteins were detected by immunohistochemistry in cystic tubules within human dysplastic kidneys, consistent with the hypothesis that these molecules modify the severity of this congenital malformation. 20007344 2010
Entrez Id: 3320
Gene Symbol: HSP90AA1
HSP90AA1
0.010 AlteredExpression disease BEFREE Ahsa1 and Hsp90 activity confers more severe craniofacial phenotypes in a zebrafish model of hypoparathyroidism, sensorineural deafness and renal dysplasia (HDR). 23720234 2013
Entrez Id: 10736
Gene Symbol: SIX2
SIX2
0.010 AlteredExpression disease BEFREE Expression of SIX2 was determined in renal cell carcinomas, nephroblastomas, and dysplastic kidneys using immunohistochemistry and quantitative real-time polymerase chain reaction. 22995329 2013
Entrez Id: 6517
Gene Symbol: SLC2A4
SLC2A4
0.010 AlteredExpression disease BEFREE Significantly reduced Glut4 levels were detected in kidneys of Tbc1d1 (-/-) mice and the dysplastic kidney of a TBC1D1 mutation carrier versus controls. 26572137 2016
Entrez Id: 55143
Gene Symbol: CDCA8
CDCA8
0.010 GeneticVariation disease BEFREE On the basis of personal observations as well as in view of data from the literature it is maintained that the BOR (branchio-oto-renal dysplasia) syndrome [12,30-32] and the BO (branchio-oto dysplasia) syndrome are in fact the same affection. 6964893 1980