Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs138490803
rs138490803
COQ7
3 0.925 0.120 16 19074000 missense variant T/C snv 8.0E-06 7.0E-06 0.010 1.000 1 2017 2017
dbSNP: rs864321686
rs864321686
COQ7
3 0.925 0.120 16 19075775 missense variant T/A snv 0.010 1.000 1 2017 2017
dbSNP: rs879253798
rs879253798
SPG7
3 1.000 0.080 16 89524099 frameshift variant TC/- delins 0.700 1.000 1 2016 2016
dbSNP: rs1057519087
rs1057519087
MFSD2A
4 0.925 0.120 1 39967632 missense variant C/T snv 7.0E-06 0.010 1.000 1 2015 2015
dbSNP: rs121918358
rs121918358
SPG7
5 0.882 0.160 16 89510539 stop gained T/A snv 4.2E-04 1.8E-04 0.700 1.000 1 2016 2016
dbSNP: rs141659620
rs141659620
SPG7
5 0.882 0.160 16 89531961 missense variant G/A;C snv 8.3E-04; 8.0E-06 0.700 1.000 1 2016 2016
dbSNP: rs72547551
rs72547551
SPG7
5 0.882 0.160 16 89550545 missense variant C/T snv 3.6E-05 1.5E-04 0.700 1.000 1 2016 2016
dbSNP: rs730882147
rs730882147
MED20
5 0.851 0.080 6 41909351 missense variant C/G snv 7.0E-06 0.010 1.000 1 2015 2015
dbSNP: rs748309520
rs748309520
SPG7
5 0.882 0.160 16 89531903 splice acceptor variant G/A snv 1.6E-05 7.0E-06 0.700 1.000 1 2016 2016
dbSNP: rs752989523
rs752989523
SPG7
5 0.882 0.160 16 89553853 stop gained G/A;C snv 8.0E-06 0.700 1.000 1 2016 2016
dbSNP: rs879253797
rs879253797
SPG7
5 0.882 0.160 16 89556954 missense variant C/T snv 1.4E-05 0.700 1.000 1 2016 2016
dbSNP: rs895293055
rs895293055
MED20
5 0.851 0.080 6 41909351 frameshift variant C/- delins 0.010 1.000 1 2015 2015
dbSNP: rs1553546045
rs1553546045
PTH2R
5 0.925 0.200 2 208442425 missense variant C/T snv 0.700 0
dbSNP: rs104894107
rs104894107
FXN
6 0.882 0.160 9 69064942 missense variant G/C;T snv 3.6E-05; 2.8E-05 0.010 1.000 1 2002 2002
dbSNP: rs587777585
rs587777585
VARS2
6 0.882 6 30918851 missense variant C/G;T snv 2.4E-05 0.010 1.000 1 2019 2019
dbSNP: rs1060502227
rs1060502227
SPAST
6 0.851 0.120 2 32136593 missense variant C/G;T snv 0.700 0
dbSNP: rs1555471098
rs1555471098
CREBBP
6 0.925 0.120 16 3728852 frameshift variant GCTGGGTGAGA/- del 0.700 0
dbSNP: rs1057516049
rs1057516049
KAT6A
7 0.851 0.040 8 41933963 frameshift variant CACT/- delins 0.700 0
dbSNP: rs1555119899
rs1555119899
ATM ; C11orf65
7 0.925 0.240 11 108326149 missense variant G/C snv 0.700 0
dbSNP: rs80338700
rs80338700
PMM2
7 0.851 0.200 16 8806398 missense variant C/G;T snv 4.0E-06; 2.4E-05 0.700 0
dbSNP: rs1057516033
rs1057516033
KAT6B
9 0.807 0.400 10 75025250 splice donor variant G/A snv 0.700 1.000 1 2016 2016
dbSNP: rs672601369
rs672601369
KIF1A
10 0.790 0.120 2 240783780 missense variant C/T snv 0.700 0
dbSNP: rs776679653
rs776679653
ISCA1
11 0.827 0.200 9 86266174 missense variant C/T snv 4.2E-06 0.700 1.000 1 2017 2017
dbSNP: rs1217391623
rs1217391623
SPG7
11 0.882 0.160 16 89556976 frameshift variant G/- del 7.0E-06 0.700 0
dbSNP: rs1247665387
rs1247665387
FA2H
14 0.807 0.360 16 74774623 missense variant C/A snv 7.0E-06 0.700 0