Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs752149020
rs752149020
CALM2
2 0.925 0.040 2 47176459 missense variant G/A;C snv 4.0E-06 0.010 < 0.001 1 2008 2008
dbSNP: rs7533552
rs7533552
COL9A2
3 0.882 0.160 1 40307477 missense variant T/A;C;G snv 0.010 1.000 1 2011 2011
dbSNP: rs798748
rs798748
SLBP ; TACC3
1 1.000 0.040 4 1715043 intron variant T/A;C snv 0.700 1.000 1 2019 2019
dbSNP: rs8044769
rs8044769
FTO
6 0.851 0.200 16 53805223 intron variant T/A;C;G snv 0.010 1.000 1 2014 2014
dbSNP: rs9930333
rs9930333
FTO
7 0.882 0.120 16 53766065 intron variant T/C;G snv 0.700 1.000 1 2019 2019
dbSNP: rs9977881
rs9977881
ERG
2 0.925 0.040 21 38635298 intron variant T/C;G snv 0.700 1.000 1 2019 2019
dbSNP: rs121912891
rs121912891
COL2A1
5 0.882 0.080 12 47976052 missense variant C/T snv 7.0E-06 0.020 1.000 2 2008 2010
dbSNP: rs143083812
rs143083812
SMO
1 1.000 0.040 7 129203569 missense variant C/T snv 4.1E-04 3.5E-04 0.710 1.000 1 2018 2018
dbSNP: rs532464664
rs532464664
CHADL
3 0.882 0.040 22 41238083 frameshift variant -/GCCCGCGC delins 4.8E-03 1.2E-02 0.700 1.000 1 2018 2018
dbSNP: rs117018441
rs117018441
EP300
1 1.000 0.040 22 41157913 intron variant G/T snv 1.2E-02 0.710 1.000 1 2018 2018
dbSNP: rs11764536
rs11764536
HDAC9
1 1.000 0.040 7 18370370 intron variant A/C snv 1.4E-02 0.700 1.000 1 2018 2018
dbSNP: rs4252548
rs4252548
IL11
4 1.000 0.040 19 55368304 missense variant C/T snv 2.1E-02 1.8E-02 0.710 1.000 2 2018 2019
dbSNP: rs75621460
rs75621460
TGFB1
3 0.882 0.040 19 41327879 intron variant G/A snv 2.0E-02 0.700 1.000 1 2019 2019
dbSNP: rs115740542
rs115740542
H2AC6 ; H2BC4
2 0.925 0.040 6 26123274 intron variant T/C snv 3.6E-02 0.700 1.000 1 2019 2019
dbSNP: rs1800562
rs1800562
HFE ; LOC108783645
262 0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 0.700 1.000 1 2018 2018
dbSNP: rs11547160
rs11547160
TCF7L1
1 1.000 0.040 2 85309292 missense variant G/A snv 4.2E-02 3.8E-02 0.010 1.000 1 2013 2013
dbSNP: rs17887218
rs17887218
TGFBR3
2 0.925 0.040 1 91714361 intron variant C/T snv 4.0E-02 0.700 1.000 1 2018 2018
dbSNP: rs34419890
rs34419890 		1 1.000 0.040 11 66734153 upstream gene variant T/C snv 4.2E-02 0.700 1.000 1 2019 2019
dbSNP: rs1800468
rs1800468
TGFB1 ; B9D2
4 0.851 0.160 19 41354682 3 prime UTR variant C/T snv 6.2E-02 5.9E-02 0.010 1.000 1 2013 2013
dbSNP: rs763780
rs763780
IL17F
87 0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 0.020 1.000 2 2018 2019
dbSNP: rs3117582
rs3117582
BAG6 ; APOM
14 0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 0.010 1.000 1 2015 2015
dbSNP: rs79056043
rs79056043
LRIG3
1 1.000 0.040 12 58895817 intron variant A/G snv 7.3E-02 0.700 1.000 1 2019 2019
dbSNP: rs12209223
rs12209223
FILIP1 ; LOC101928540
2 1.000 0.040 6 75454873 intron variant C/A snv 7.3E-02 0.700 1.000 2 2018 2019
dbSNP: rs288326
rs288326
FRZB
9 0.807 0.120 2 182838608 missense variant G/A snv 8.2E-02 8.3E-02 0.030 1.000 3 2006 2012
dbSNP: rs80287694
rs80287694
BMP5
1 1.000 0.040 6 55772142 intron variant A/G snv 0.11 0.700 1.000 1 2019 2019