Gene: PCAT1 ×
Source: BEFREE ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs6983267
rs6983267
POU5F1B ; CASC8 ; PCAT1 ; CCAT2
55 0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 0.800 0.871 24 2007 2019
dbSNP: rs16901979
rs16901979
PCAT1 ; CASC19
16 0.724 0.480 8 127112671 intron variant C/A snv 0.16 0.800 0.955 17 2007 2019
dbSNP: rs6983561
rs6983561
PCAT1 ; CASC19
3 0.925 0.080 8 127094635 intron variant A/C snv 0.17 0.780 1.000 8 2008 2017
dbSNP: rs13254738
rs13254738
PCAT1 ; PRNCR1 ; CASC19
8 0.807 0.160 8 127092098 non coding transcript exon variant C/A;T snv 0.720 0.667 2 2008 2012
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
9 0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv 0.720 1.000 2 2010 2014
dbSNP: rs16902094
rs16902094
CASC8 ; PCAT1 ; CASC21
2 0.882 0.160 8 127308101 intron variant A/G snv 0.15 0.720 1.000 2 2009 2017
dbSNP: rs188140481
rs188140481
PCAT1 ; CASC19
4 0.925 0.080 8 127179427 non coding transcript exon variant T/A;C snv 0.720 1.000 2 2012 2015
dbSNP: rs116041037
rs116041037
PCAT1 ; CASC19
2 0.925 0.080 8 127119564 intron variant G/A snv 1.0E-02 0.710 1.000 1 2015 2015
dbSNP: rs72725854
rs72725854
PCAT1
2 0.925 0.080 8 127062570 intron variant A/G;T snv 0.710 1.000 1 2018 2018
dbSNP: rs16901966
rs16901966
PCAT1 ; CASC19
3 0.925 0.080 8 127098007 intron variant A/G snv 0.13 0.030 1.000 3 2012 2016
dbSNP: rs620861
rs620861
POU5F1B ; CASC8 ; PCAT1 ; CASC21
2 0.925 0.080 8 127323428 intron variant G/A snv 0.36 0.030 0.667 3 2009 2017
dbSNP: rs13281615
rs13281615
POU5F1B ; CASC8 ; PCAT1 ; CASC21
17 0.716 0.360 8 127343372 intron variant A/G snv 0.43 0.020 1.000 2 2008 2009
dbSNP: rs7837328
rs7837328
POU5F1B ; CASC8 ; PCAT1
8 0.882 0.120 8 127410882 intron variant A/G snv 0.52 0.020 1.000 2 2014 2014
dbSNP: rs10505474
rs10505474
POU5F1B ; CASC8 ; PCAT1
3 0.925 0.080 8 127405259 intron variant T/C snv 0.47 0.010 1.000 1 2014 2014
dbSNP: rs12334903
rs12334903
PCAT1 ; LOC105375751
2 0.925 0.080 8 127038268 intron variant T/C snv 0.44 0.010 1.000 1 2010 2010
dbSNP: rs16901946
rs16901946
PCAT1 ; PRNCR1 ; CASC19
8 0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 0.010 1.000 1 2018 2018
dbSNP: rs1902432
rs1902432
PCAT1 ; LOC105375751
4 0.851 0.120 8 127012566 intron variant A/G snv 0.25 0.010 1.000 1 2018 2018
dbSNP: rs378854
rs378854
CASC8 ; PCAT1 ; CASC21
2 0.925 0.080 8 127311574 non coding transcript exon variant C/T snv 0.31 0.010 1.000 1 2011 2011
dbSNP: rs7014346
rs7014346
POU5F1B ; CASC8 ; PCAT1
5 0.732 0.240 8 127412547 intron variant A/G snv 0.63 0.010 1.000 1 2015 2015
dbSNP: rs7463708
rs7463708
PCAT1 ; PRNCR1 ; CASC19
7 0.807 0.120 8 127091810 non coding transcript exon variant G/T snv 0.27 0.010 1.000 1 2011 2011
dbSNP: rs7824364
rs7824364
PCAT1 ; CASC19
2 0.925 0.080 8 127123120 intron variant T/C snv 7.9E-02 0.010 1.000 1 2017 2017
dbSNP: rs980171
rs980171
PCAT1 ; LOC105375751
2 0.925 0.080 8 127042277 intron variant A/G snv 0.45 0.010 1.000 1 2010 2010