Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE After controlling for the effect of MS status, there was no correlation of RNF43 frameshift mutation with distant metastasis (OR = 1.57 [0.75, 3.28]) and advanced TNM stages (OR = 0.98 [0.58, 1.67]), but RNF43 frameshift mutations still occur more frequently in right colon (OR = 2.58 [1.49, 4.47]) and with BRAF V600E mutation (OR = 1.94 [1.22, 3.10]). 31122752

2019

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE After controlling for the effect of MS status, there was no correlation of RNF43 frameshift mutation with distant metastasis (OR = 1.57 [0.75, 3.28]) and advanced TNM stages (OR = 0.98 [0.58, 1.67]), but RNF43 frameshift mutations still occur more frequently in right colon (OR = 2.58 [1.49, 4.47]) and with BRAF V600E mutation (OR = 1.94 [1.22, 3.10]). 31122752

2019

dbSNP: rs121434569
rs121434569
0.090 GeneticVariation BEFREE After her death, an autopsy revealed SCLC transformation and EGFR T790M secondary mutation (T790M) as mutually exclusive resistance mechanisms occurring differently in different metastases; two liver metastases (SCLC versus AC with T790M) and two lymph node metastases (SCLC versus AC with T790M) were analyzed to compare the expression status of immune markers by immunohistochemistry and by an immune oncology gene expression panel. 28193529

2017

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE All four patients with distant metastasis had BRAF(V600E) mutation. 22767446

2012

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE All four patients with distant metastasis had BRAF(V600E) mutation. 22767446

2012

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE All patients with lateral cervical node metastasis (n=9), and all but one tumor with extrathyroidal extension (n=17/18) showed BRAF(V600E) mutation. 22918165

2013

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE All patients with lateral cervical node metastasis (n=9), and all but one tumor with extrathyroidal extension (n=17/18) showed BRAF(V600E) mutation. 22918165

2013

dbSNP: rs4986790
rs4986790
0.040 GeneticVariation BEFREE All polymorphisms detected were also significantly associated with the metastatic disease (p<0.001) leading to shorter overall survival (p<0.001); whereas, TLR4 Asp299Gly and Thr399Ile polymorphisms were significantly associated with KRAS mutations. 29883450

2018

dbSNP: rs4986791
rs4986791
0.020 GeneticVariation BEFREE All polymorphisms detected were also significantly associated with the metastatic disease (p<0.001) leading to shorter overall survival (p<0.001); whereas, TLR4 Asp299Gly and Thr399Ile polymorphisms were significantly associated with KRAS mutations. 29883450

2018

dbSNP: rs1053129
rs1053129
0.010 GeneticVariation BEFREE Also patients homozygous for the G allele of rs1053129 in the dihydrofolate reductase (DHFR) gene were more likely to have a metastasis (45%, P= 0.005), and the methylenetetetrahydrofolate reductase (MTHFR) 677C allele was associated with higher degree of liver toxicity (88%, P=0.007). 25778468

2015

dbSNP: rs121912664
rs121912664
0.020 GeneticVariation BEFREE Among the 19 patients with the Arg337His mutation, only one boy and three adults showed fatal evolution or recurrent metastases. 11600572

2001

dbSNP: rs4986790
rs4986790
0.040 GeneticVariation BEFREE An improved overall survival (Hazard ratio HR 0.53, 95% CI 0.32-0.88) and survival following metastasis (HR 0.55, 95% CI 0.34-0.91) were observed in carriers of the variant allele (D299G) of TLR4-rs4986790. 21931695

2011

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Analysis of the metastatic tumor demonstrated clonal expansion of a BRAF V600E subpopulation. 29744614

2018

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE Analysis of the metastatic tumor demonstrated clonal expansion of a BRAF V600E subpopulation. 29744614

2018

dbSNP: rs1057519816
rs1057519816
0.010 GeneticVariation BEFREE Another patient with the S310F mutation had an apocrine carcinoma with seven lymph nodes positive for metastasis, classified as HER2 3+ by the HercepTest, but which was FISH-negative, as well as ER-negative and PgR-negative. 26642960

2016

dbSNP: rs121913227
rs121913227
0.080 GeneticVariation BEFREE As to the B-raf protein sequence, the acidic amino acid transitions V599E and V599K were predicted in 19/60 (32%) and 6/60 (10%) cases, respectively, but were not associated with enhanced risk for subsequent metastasis in patients' follow up. 15935100

2005

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Associations between BRAF V600E and TERT promoter mutations and clinicopathological features, Tumor-Node-Metastasis stage, initial risk, response to therapy, follow-up, and final disease outcome were assessed according to American Thyroid Association 2015 criteria and the American Joint Committee on Cancer/Tumor-Node-Metastasis (8th edition) staging system.Median follow-up was 120 months. 31305897

2019

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE Associations between BRAF V600E and TERT promoter mutations and clinicopathological features, Tumor-Node-Metastasis stage, initial risk, response to therapy, follow-up, and final disease outcome were assessed according to American Thyroid Association 2015 criteria and the American Joint Committee on Cancer/Tumor-Node-Metastasis (8th edition) staging system.Median follow-up was 120 months. 31305897

2019

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE At univariate analysis the worst outcome for PTC patients was significantly correlated with clinicopathological features (i.e. age, tumor size, extrathyroid extension, lymph node and distant metastases, advanced stage, vascular endothelial growth factor expression, and vascular invasion) and the BRAF(V600E) mutation (P < 0.002). 18682506

2008

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE At univariate analysis the worst outcome for PTC patients was significantly correlated with clinicopathological features (i.e. age, tumor size, extrathyroid extension, lymph node and distant metastases, advanced stage, vascular endothelial growth factor expression, and vascular invasion) and the BRAF(V600E) mutation (P < 0.002). 18682506

2008

dbSNP: rs12190287
rs12190287
0.010 GeneticVariation BEFREE Besides, rs12190287 CG and GG genotypes are associated with Enneking stage and potential in forming metastasis of osteosarcoma. 28663539

2017

dbSNP: rs115785973
rs115785973
0.010 GeneticVariation BEFREE Besides, SNP rs115785973 in SOCS3 was identified as a risk factor in the occurrence of GC highly associated with poor differentiation grade, larger tumor size and metastasis. 27160093

2016

dbSNP: rs754854286
rs754854286
0.010 GeneticVariation BEFREE Bioluminescent imaging showed that intracardiac injection of MCF7/TG2-C277S cells in mice promoted bone tumors, especially in the knee and jaw, but MCF7/TG2-C277S cells ectopically expressing miR-205 did not metastasize. 30949413

2019

dbSNP: rs3804329
rs3804329
0.010 GeneticVariation BEFREE Both rs1322178 and rs3804329 can predict early distant metastasis of patients. 29207660

2017

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Both the metastasis and the primary thyroid tumor are positive for BRAF(V600E) mutation. 22435913

2012