Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs200115000
rs200115000
0.010 GeneticVariation BEFREE Recently, a de novo candidate mutation (p.Arg292Pro) in the gamma isoform of CAMK2 (CAMK2G) was identified in a patient with severe intellectual disability (ID), but the mechanism(s) by which this mutation causes ID is unknown. 30184290

2018

dbSNP: rs727505397
rs727505397
0.010 GeneticVariation BEFREE We report three severely affected girls with heterozygous CASK missense mutations (M519T (2), G659D (1)) who exhibit ID, microcephaly, and hindbrain hypoplasia. 29426960

2018

dbSNP: rs797045036
rs797045036
0.010 GeneticVariation BEFREE A missense variant (c. 1171T>C) in the <i>CRBN</i> gene was identified in five individuals with severe intellectual disability (ID) in a consanguineous Saudi family. 28143899

2017

dbSNP: rs869312865
rs869312865
0.010 GeneticVariation BEFREE The p.(Asp227His) variant is located in the same aminoterminal protein domain as the recently published p.(Arg217Trp), which was found at the homozygous state in two patients with a similar phenotype of severe intellectual disability and autistic features but without epilepsy. 28051072

2017

dbSNP: rs794729668
rs794729668
0.010 GeneticVariation BEFREE Using exome sequencing, we have been able to identify homozygous mutation p.(Tyr39Cys) in MED25 as the cause of a syndrome characterized by eye, brain, cardiac and palatal abnormalities as well as growth retardation, microcephaly and severe intellectual disability in seven patients from four unrelated families, all originating from the same village. 25792360

2015

dbSNP: rs201968272
rs201968272
0.010 GeneticVariation BEFREE Here, using homozygosity mapping in a Lebanese consanguineous family followed by exome sequencing, we identified a novel homozygous mutation (c.788G>A [p.R263Q]) in DDX11 in three affected siblings with severe intellectual disability and many of the congenital abnormalities reported in the WABS original case. 23033317

2013

dbSNP: rs387906739
rs387906739
0.010 GeneticVariation BEFREE In this report the identification of two de novo missense mutations in DYNC1H1 (p.Glu1518Lys and p.His3822Pro) in two patients with severe intellectual disability and variable neuronal migration defects is described. 22368300

2012

dbSNP: rs387906740
rs387906740
0.010 GeneticVariation BEFREE In this report the identification of two de novo missense mutations in DYNC1H1 (p.Glu1518Lys and p.His3822Pro) in two patients with severe intellectual disability and variable neuronal migration defects is described. 22368300

2012

dbSNP: rs202153551
rs202153551
0.010 GeneticVariation BEFREE A novel c.2854C>T (p.R952X) was identified in an ambulatory girl who had severe mental retardation, multiple types of seizures without Rett-like features. 21775177

2011

dbSNP: rs1217691063
rs1217691063
0.010 GeneticVariation BEFREE Infant C677T MTHFR polymorphism and severe mental retardation. 17149733

2007

dbSNP: rs63485860
rs63485860
0.010 GeneticVariation BEFREE The novel missense change, c.617G > C (p.G206A), was present in one autistic male with severe mental retardation and absence of language, and segregates in his maternal family. 17427193

2007

dbSNP: rs28934908
rs28934908
0.010 GeneticVariation BEFREE In a family study, the A140V mutation was found to segregate in the affected daughter and in four adult sons with severe mental retardation. 11007980

2000

dbSNP: rs1057521721
rs1057521721
A 0.700 GeneticVariation CLINVAR A point mutation in the ion conduction pore of AMPA receptor GRIA3 causes dramatically perturbed sleep patterns as well as intellectual disability. 29016847

2017

dbSNP: rs1553630279
rs1553630279
T 0.700 CausalMutation CLINVAR Clinical features associated with CTNNB1 de novo loss of function mutations in ten individuals. 27915094

2017

dbSNP: rs1554041295
rs1554041295
T 0.700 CausalMutation CLINVAR A Recurrent De Novo Nonsense Variant in ZSWIM6 Results in Severe Intellectual Disability without Frontonasal or Limb Malformations. 29198722

2017

dbSNP: rs386834034
rs386834034
A 0.700 CausalMutation CLINVAR A prospective evaluation of whole-exome sequencing as a first-tier molecular test in infants with suspected monogenic disorders. 26938784

2016

dbSNP: rs797045140
rs797045140
C 0.700 CausalMutation CLINVAR A novel splicing mutation in the IQSEC2 gene that modulates the phenotype severity in a family with intellectual disability. 26733290

2016

dbSNP: rs869312873
rs869312873
T 0.700 CausalMutation CLINVAR A novel homozygous splice site mutation in NALCN identified in siblings with cachexia, strabismus, severe intellectual disability, epilepsy and abnormal respiratory rhythm. 26923739

2016

dbSNP: rs796051881
rs796051881
CA 0.700 CausalMutation CLINVAR A novel type of rhizomelic chondrodysplasia punctata, RCDP5, is caused by loss of the PEX5 long isoform. 26220973

2015

dbSNP: rs1553630279
rs1553630279
T 0.700 CausalMutation CLINVAR A new intellectual disability syndrome caused by CTNNB1 haploinsufficiency. 24668549

2014

dbSNP: rs796052056
rs796052056
CGT 0.700 CausalMutation CLINVAR Persistent pulmonary arterial hypertension in the newborn (PPHN): a frequent manifestation of TMEM70 defective patients. 24485043

2014

dbSNP: rs1554150607
rs1554150607
G 0.700 CausalMutation CLINVAR Refining the phenotype associated with MEF2C point mutations. 23001426

2013

dbSNP: rs796052056
rs796052056
CGT 0.700 CausalMutation CLINVAR TMEM70 mutations are a common cause of nuclear encoded ATP synthase assembly defect: further delineation of a new syndrome. 21147908

2011

dbSNP: rs1554150607
rs1554150607
G 0.700 CausalMutation CLINVAR Mutations in MEF2C from the 5q14.3q15 microdeletion syndrome region are a frequent cause of severe mental retardation and diminish MECP2 and CDKL5 expression. 20513142

2010

dbSNP: rs1554150607
rs1554150607
G 0.700 CausalMutation CLINVAR MEF2C haploinsufficiency caused by either microdeletion of the 5q14.3 region or mutation is responsible for severe mental retardation with stereotypic movements, epilepsy and/or cerebral malformations. 19592390

2010