Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE We also found that rs6871626 showed a significant association with clinical manifestations of TAK, including increased risk and severity of aortic regurgitation, a representative severe complication of TAK. 23830516

2013

dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE IL12B rs6871626 did not show an association with IBD-TA compared with that with TA without IBD. 28449344

2017

dbSNP: rs6871626
rs6871626
0.050 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs56167332
rs56167332
0.020 GeneticVariation BEFREE We also established the genetic association between IL12B and Takayasu arteritis (rs56167332, OR = 1.54, p = 2.18 × 10(-8)). 23830517

2013

dbSNP: rs56167332
rs56167332
0.020 GeneticVariation BEFREE Four single nucleotide polymorphisms (SNPs) those locate in the IL12B region (rs56167332), the MLX region (rs665268), the FCGR2A/FCGR3A locus (rs10919543), and the HLA-B/MICA locus (rs12524487), associated with TA in different population, were genotyped in 123 Chinese TA patients and 147 healthy controls from January 2013 to August 2014. 26996483

2016

dbSNP: rs2836878
rs2836878
0.010 GeneticVariation BEFREE We identified genetic susceptibility loci for Takayasu arteritis with a genome-wide level of significance in IL6 (rs2069837) (odds ratio [OR] 2.07, P = 6.70 × 10(-9)), RPS9/LILRB3 (rs11666543) (OR 1.65, P = 2.34 × 10(-8)), and an intergenic locus on chromosome 21q22 (rs2836878) (OR 1.79, P = 3.62 × 10(-10)). 25604533

2015

dbSNP: rs4921492
rs4921492
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs4921493
rs4921493
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs60689680
rs60689680
0.010 GeneticVariation BEFREE We demonstrated a allele association between the four SNPs of IL12B and TA (rs6871626: OR 1.52, 95% CI 1.26-1.83; rs4921492: OR 1.46, 95% CI 1.21-1.75; rs60689680: OR 1.41, 95% CI 1.17-1.69; rs4921493: OR 1.45, 95% CI 1.21-1.75, all P <sub>c</sub>  < 10<sup>- 3</sup> ). 28160070

2017

dbSNP: rs9366782
rs9366782
0.010 GeneticVariation BEFREE Our findings indicated that rs12524487 in HLA-B/MICA was a genetic risk factor for TA in a Chinese Han population and rs9366782 in this region was associated with ischemic brain disease in TA but not TA susceptibility. 28261975

2018

dbSNP: rs8111
rs8111
0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs4410768
rs4410768
G 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs1205
rs1205
CRP
0.010 GeneticVariation BEFREE T allele of rs1205 in CRP gene was less frequent in TA. 29024426

2018

dbSNP: rs41267090
rs41267090
T 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs7743661
rs7743661
C 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs2457837
rs2457837
T 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs117298325
rs117298325
C 0.700 GeneticVariation GWASCAT Genetic determinants and an epistasis of LILRA3 and HLA-B*52 in Takayasu arteritis. 30498034

2018

dbSNP: rs12111032
rs12111032
G 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs1383258
rs1383258
A 0.700 GeneticVariation GWASCAT Identification of Susceptibility Loci in IL6, RPS9/LILRB3, and an Intergenic Locus on Chromosome 21q22 in Takayasu Arteritis in a Genome-Wide Association Study. 25604533

2015

dbSNP: rs113452171
rs113452171
T 0.700 GeneticVariation GWASCAT Identification of multiple genetic susceptibility loci in Takayasu arteritis. 23830517

2013

dbSNP: rs1264457
rs1264457
0.010 GeneticVariation BEFREE sHLA-E level is useful as a biomarker of disease activity and course in TA patients. rs1264457 polymorphism is neither associated with susceptibility nor did it influence sHLA-E levels in TA. 28425192

2018

dbSNP: rs582054
rs582054
0.010 GeneticVariation BEFREE However, a trend for IL12A rs582054 and IL23R rs1004819 in association with the TA phenotype was detected. 26987707

2016

dbSNP: rs763780
rs763780
0.010 GeneticVariation BEFREE G allele of rs763780 in IL-17F gene was protectively associated against susceptibility to TA. 28438554

2018

dbSNP: rs1004819
rs1004819
0.010 GeneticVariation BEFREE However, a trend for IL12A rs582054 and IL23R rs1004819 in association with the TA phenotype was detected. 26987707

2016

dbSNP: rs2069837
rs2069837
0.720 GeneticVariation GWASCAT We identified genetic susceptibility loci for Takayasu arteritis with a genome-wide level of significance in IL6 (rs2069837) (odds ratio [OR] 2.07, P = 6.70 × 10(-9)), RPS9/LILRB3 (rs11666543) (OR 1.65, P = 2.34 × 10(-8)), and an intergenic locus on chromosome 21q22 (rs2836878) (OR 1.79, P = 3.62 × 10(-10)). 25604533

2015