Disease: Parkinson Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs121909329
VCP
0.763 0.200 9 35065363 missense variant C/A;G;T snv 11
rs121909330
VCP
0.752 0.200 9 35065364 missense variant G/A;C;T snv 11
rs121912443
SOD1
0.732 0.160 21 31663857 missense variant A/G snv 15
rs1572931
RAB29 ; LOC105371702
0.925 0.080 1 205775090 splice region variant C/A;T snv 0.14 2
rs2275294
ZNF512B
0.925 0.080 20 63962894 intron variant G/A snv 0.25 3
rs267606929
OPTN
0.827 0.120 10 13132098 missense variant A/G snv 5
rs2736990
SNCA
0.882 0.080 4 89757390 intron variant G/A;T snv 4
rs34016896
LOC105374187
0.925 0.080 3 161275076 regulatory region variant C/T snv 0.28 3
rs356220
LOC105377329 ; SNCA
0.925 0.080 4 89720189 intron variant T/A;C snv 3
rs35801418
LRRK2
0.827 0.120 12 40321114 missense variant A/G snv 7
rs3794087
SLC1A2
0.851 0.120 11 35308068 intron variant G/T snv 0.20 6
rs3849942
C9orf72 ; LOC107987057
0.776 0.200 9 27543283 non coding transcript exon variant T/A;C snv 9
rs5848
FAM171A2 ; GRN
0.708 0.120 17 44352876 3 prime UTR variant C/T snv 0.41 17
rs591486
ERCC6L2
0.925 0.080 9 95887764 intron variant A/G snv 0.44 2
rs7224296
LRRC37A2 ; NSF
0.882 0.160 17 46722680 intron variant G/A snv 0.59 5
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs11701
RNASE4 ; ANG
0.925 0.080 14 20693894 synonymous variant T/A;C;G snv 4.0E-06; 0.14 2
rs746682028
BDNF ; BDNF-AS
0.645 0.480 11 27658414 missense variant C/A;T snv 4.0E-06; 4.0E-06 36
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42 72
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs121909334
VCP
0.752 0.200 9 35065255 missense variant C/T snv 1.6E-05 10
rs367543041
TARDBP
0.742 0.200 1 11022553 missense variant G/A;C snv 3.0E-05 15
rs75932628
LOC105375056 ; TREM2
0.662 0.480 6 41161514 missense variant C/A;T snv 6.8E-05; 2.6E-03 28
rs80356718
TARDBP
0.827 0.120 1 11022209 missense variant A/G snv 7.6E-05 4.9E-05 5