DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of urinary bladder, C0005684

Disease: Neoplasms

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2292016	OSMR-AS1 ; OSMR	0.851	0.120	5	38845758	non coding transcript exon variant	G/T	snv		1.9E-02	5
rs587783064	TP53	0.851	0.120	17	7669626	missense variant	C/A;T	snv			5
rs779682021	CYP1A1	0.882	0.120	15	74721227	missense variant	A/C	snv			5
rs798766	TACC3	0.851	0.120	4	1732512	intron variant	T/C	snv		0.76	6
rs11466445	TGFBR1	0.851	0.160	9	99105256	inframe insertion	GCGGCGGCGGCGGCG/-;GCG;GCGGCG;GCGGCGGCG;GCGGCGGCGGCG;GCGGCGGCGGCGGCGGCG;GCGGCGGCGGCGGCGGCGGCG;GCGGCGGCGGCGGCGGCGGCGGCG;GCGGCGGCGGCGGCGGCGGCGGCGGCG	delins			5
rs12628	LRRC56 ; HRAS	0.776	0.160	11	534242	synonymous variant	A/G	snv	0.32	0.34	10
rs138213197	HOXB13	0.701	0.240	17	48728343	missense variant	C/T	snv	1.8E-03	1.6E-03	24
rs17881656	FGFR3	0.925	0.240	4	1804404	missense variant	T/A;C	snv	8.0E-06; 3.3E-03		3
rs1800371	TP53	0.742	0.240	17	7676230	missense variant	G/A;T	snv	1.2E-03		15
rs386675647	UGT2B7	0.790	0.240	4	69098619	missense variant	AT/TC	mnv			10
rs9642880	CASC11	0.776	0.240	8	127705823	intron variant	G/A;T	snv			9
rs121913479	FGFR3	0.763	0.280	4	1804362	missense variant	G/A;T	snv	4.0E-06		10
rs1805105	AXIN1	0.776	0.280	16	346264	synonymous variant	A/G	snv	0.61	0.69	11
rs2107425	MRPL23 ; H19	0.732	0.280	11	1999845	intron variant	C/T	snv			16
rs3807987	CAV1	0.732	0.280	7	116539780	intron variant	G/A	snv		7.6E-02	17
rs9904341	BIRC5	0.695	0.280	17	78214286	5 prime UTR variant	G/A;C;T	snv	0.38; 4.8E-06		20
rs2294008	PSCA ; JRK	0.672	0.320	8	142680513	5 prime UTR variant	C/T	snv	0.46	0.45	28
rs2306283	SLCO1B1	0.742	0.320	12	21176804	missense variant	A/G;T	snv	0.47		16
rs402710	CLPTM1L	0.716	0.320	5	1320607	non coding transcript exon variant	C/T	snv	0.33	0.38	18
rs7439366	UGT2B7	0.752	0.320	4	69098620	missense variant	T/C	snv	0.56	0.57	16
rs7804372	CAV1	0.716	0.320	7	116554174	intron variant	T/A	snv		0.27	19
rs1056827	CYP1B1 ; CYP1B1-AS1	0.683	0.400	2	38075034	missense variant	C/A	snv	0.32	0.35	24
rs1801516	ATM	0.627	0.400	11	108304735	missense variant	G/A	snv	0.11	0.11	39
rs20576	TNFRSF10A	0.637	0.400	8	23200707	missense variant	T/G	snv	0.15	0.14	34
rs762551	CYP1A2	0.701	0.400	15	74749576	intron variant	C/A	snv		0.67	23