Disease: Squamous cell carcinoma of the head and neck
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1057519887
EGFR
0.925 0.040 7 55154128 missense variant GC/AA;AT mnv 3
rs769696078
EGFR
0.925 0.040 7 55154128 missense variant G/A snv 3
rs149840192
EGFR
0.807 0.080 7 55154129 missense variant C/A;T snv 7
rs1057519926
PIK3CA
0.776 0.200 3 179210293 missense variant A/T snv 10
rs1057519986
TP53
0.776 0.240 17 7673811 missense variant A/C;G snv 10
rs1057519987
TP53
0.776 0.280 17 7673810 missense variant A/C snv 10
rs1057519988
TP53
0.776 0.240 17 7673812 missense variant A/C;G;T snv 10
rs1057519933
PIK3CA
0.790 0.240 3 179199156 missense variant A/G snv 11
rs1057519934
PIK3CA
0.790 0.240 3 179199158 missense variant G/C snv 11
rs1057519935
PIK3CA
0.790 0.240 3 179199157 missense variant A/G snv 11
rs1057519936
PIK3CA
0.776 0.200 3 179234284 missense variant A/G;T snv 11
rs1057519937
PIK3CA
0.776 0.200 3 179234285 missense variant T/C snv 11
rs397516896
BRAF
0.763 0.360 7 140753355 missense variant C/G;T snv 11
rs1057519978
TP53
0.763 0.360 17 7675191 missense variant A/C;G;T snv 12
rs1057520004
TP53
0.752 0.240 17 7674884 missense variant A/C;T snv 12
rs765848205
TP53
0.763 0.240 17 7674253 missense variant A/C;G;T snv 12
rs1057519940
PIK3CA
0.752 0.200 3 179218308 missense variant G/T snv 13
rs1057519977
TP53
0.763 0.360 17 7675189 missense variant G/C snv 13
rs587777790
PIK3CA
0.732 0.280 3 179199690 missense variant G/A snv 14
rs745564626
XRCC3 ; KLC1
0.752 0.280 14 103699003 missense variant C/G;T snv 4.3E-05 14
rs587780071
TP53
0.732 0.240 17 7674951 missense variant G/A snv 15
rs587782289
TP53
0.752 0.240 17 7674257 missense variant A/C;G;T snv 15
rs587782664
TP53
0.742 0.320 17 7674252 missense variant C/A;G;T snv 4.0E-06 15
rs730882026
TP53
0.742 0.440 17 7674256 missense variant T/C;G snv 15
rs1057519983
TP53
0.724 0.360 17 7673797 missense variant A/G snv 16