DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of breast, C0006142

Disease: Malignant neoplasm of prostate

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10165970	NPAS2	0.708	0.320	2	100840527	intron variant	G/A	snv		0.16	18
rs17024869	NPAS2	0.708	0.320	2	100843581	intron variant	T/C	snv		8.3E-02	18
rs17024926	NPAS2	0.851	0.120	2	100889540	intron variant	T/C	snv		0.34	4
rs895520	NPAS2	0.689	0.320	2	100961475	intron variant	G/A	snv		0.35	23
rs7581886	NPAS2	0.708	0.320	2	100964784	intron variant	C/T	snv		0.92	18
rs7965399	LOC105369944	0.851	0.120	12	102497908	regulatory region variant	T/A;C	snv			5
rs743572	CYP17A1	0.672	0.360	10	102837395	5 prime UTR variant	A/G;T	snv	0.40; 8.1E-06		24
rs2486758	CYP17A1	0.742	0.160	10	102837723	upstream gene variant	T/C	snv		0.18	11
rs2296147	BIVM-ERCC5 ; ERCC5	0.695	0.280	13	102846025	5 prime UTR variant	T/C	snv		0.38	21
rs5498	ICAM4 ; ICAM1	0.531	0.760	19	10285007	missense variant	A/G	snv	0.44	0.37	99
rs1047768	ERCC5 ; BIVM-ERCC5	0.695	0.320	13	102852167	synonymous variant	T/C	snv	0.52	0.59	20
rs17655	BIVM-ERCC5 ; ERCC5	0.597	0.560	13	102875652	missense variant	G/C	snv	0.28	0.30	52
rs861539	KLC1 ; XRCC3	0.519	0.680	14	103699416	missense variant	G/A	snv	0.29	0.30	104
rs1799796	XRCC3 ; KLC1	0.790	0.240	14	103699590	intron variant	T/A;C	snv	0.31		7
rs3730358	AKT1	0.724	0.360	14	104780070	intron variant	G/A;C	snv	0.16; 4.0E-03		14
rs121434592	AKT1	0.595	0.640	14	104780214	missense variant	C/T	snv	4.0E-06		54
rs768362387	ATM	0.851	0.360	11	108253846	stop gained	C/A	snv			5
rs758081262	ATM	0.851	0.360	11	108267258	stop gained	C/T	snv	1.2E-05		4
rs1800057	ATM	0.776	0.200	11	108272729	missense variant	C/A;G	snv	1.7E-02		11
rs1801516	ATM	0.627	0.400	11	108304735	missense variant	G/A	snv	0.11	0.11	39
rs3787016	POLR2E	0.677	0.280	19	1090804	intron variant	A/G	snv		0.78	24
rs768623239	GSTM1 ; GSTM2	0.662	0.640	1	109689278	missense variant	A/G	snv	1.5E-05		26
rs2301241	TXN	0.827	0.160	9	110257228	upstream gene variant	G/A;T	snv			5
rs2536	MTOR	0.776	0.240	1	11106656	3 prime UTR variant	T/C	snv		5.8E-02	11
rs4938723	MIR34C ; BTG4 ; MIR34B ; LOC728196	0.574	0.680	11	111511840	intron variant	T/C	snv		0.32	60