Disease: Glioma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2235544
DIO1
0.742 0.240 1 53909897 intron variant C/A;T snv 0.53; 4.0E-06 14
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs5744533
POLK ; CERT1
0.807 0.120 5 75510279 intron variant C/A;T snv 6
rs7164773
RORA
0.790 0.240 15 60775749 intron variant C/A;T snv 10
rs1353702185
MDM2
0.550 0.720 12 68839311 missense variant C/G snv 4.0E-06 79
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs1805794
NBN
0.605 0.600 8 89978251 missense variant C/G snv 0.35 0.31 41
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs20417
PACERR ; PTGS2
0.576 0.600 1 186681189 non coding transcript exon variant C/G;T snv 57
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs12917
MGMT ; LOC105378560
0.605 0.480 10 129708019 missense variant C/T snv 0.14 0.14 45
rs17748
TREH ; PHLDB1
0.827 0.080 11 118657714 3 prime UTR variant C/T snv 0.18 5
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13 62
rs3213801
POLK
0.882 0.080 5 75581441 synonymous variant C/T snv 0.24 0.22 3
rs371074389
LOC112268426 ; CXCR4
0.732 0.320 2 136115226 synonymous variant C/T snv 4.0E-06 4.2E-05 16