Disease: Glioma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11860248
RBBP6
0.882 0.040 16 24566445 intron variant T/G snv 0.27 5
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs2853676
TERT
0.667 0.560 5 1288432 intron variant T/A;C snv 29
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs3791679
EFEMP1 ; LOC112268416
0.925 0.120 2 55869757 intron variant A/G snv 0.20 11
rs4938723
MIR34C ; BTG4 ; MIR34B ; LOC728196
0.574 0.680 11 111511840 intron variant T/C snv 0.32 60
rs4977574
CDKN2B-AS1
0.695 0.520 9 22098575 intron variant A/G;T snv 26
rs55705857
CCDC26
0.732 0.080 8 129633446 intron variant A/G snv 3.9E-02 16
rs6010620
RTEL1 ; RTEL1-TNFRSF6B
0.701 0.360 20 63678486 intron variant A/C;G snv 21
rs7003908
PRKDC
0.716 0.320 8 47858141 intron variant C/A snv 0.66 16
rs71305152
ZFPM2
0.882 0.040 8 105437494 intron variant -/TTTTCT delins 0.43 5
rs7164773
RORA
0.790 0.240 15 60775749 intron variant C/A;T snv 10
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242