Disease: Thyroid Neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1031583860
GLYAT
0.882 0.080 11 58709815 missense variant T/C snv 3
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs104894228
LRRC56 ; HRAS
0.605 0.560 11 534286 missense variant C/A;G;T snv 48
rs1057519695
NRAS
0.641 0.520 1 114713907 missense variant TT/CA;CC mnv 35
rs1057519834
NRAS
0.658 0.480 1 114713908 missense variant TG/CT mnv 31
rs1064795638
BAP1
0.851 0.080 3 52403251 stop gained G/A snv 7
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs1136201
ERBB2
0.645 0.280 17 39723335 missense variant A/G;T snv 0.20 34
rs11554290
NRAS
0.583 0.600 1 114713908 missense variant T/A;C;G snv 59
rs1169803481
EGFR
0.807 0.160 7 55198851 missense variant A/G snv 4.0E-06 7
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs1418810723
FN1
0.851 0.080 2 215409981 missense variant A/T snv 8.0E-06 9
rs17879961
CHEK2
0.597 0.480 22 28725099 missense variant A/C;G snv 4.1E-03 53
rs1799939
RET
0.658 0.280 10 43114671 missense variant G/A;C;T snv 0.21 27
rs1800858
RET
0.851 0.160 10 43100520 synonymous variant A/C;G snv 0.73 4
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs2227869
ERCC5 ; BIVM-ERCC5
0.790 0.240 13 102862735 missense variant G/A;C snv 4.3E-02 9
rs2227983
EGFR
0.658 0.520 7 55161562 missense variant G/A;C;T snv 0.29 31
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs2708896
PKD1L1
0.882 0.080 7 47955186 upstream gene variant T/C;G snv 3
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs747463591
CCDC6
0.882 0.080 10 59906391 missense variant C/A;G;T snv 4.9E-06; 9.9E-06 3