Disease: Inflammatory Bowel Diseases
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 7
rs2189234
TET2
1.000 0.040 4 105154341 intron variant T/G snv 0.62 3
rs7746082 0.851 0.160 6 105987394 regulatory region variant G/A;C snv 3
rs4946717
PRDM1
0.827 0.120 6 106026874 intron variant C/A;G;T snv 6
rs3776414
DAP
0.827 0.120 5 10689450 intron variant T/G snv 0.48 6
rs2930047
DAP
0.925 0.040 5 10695414 intron variant T/C snv 0.49 3
rs4380874 1.000 0.040 7 107839870 intergenic variant T/A;C;G snv 2
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs3851228
LOC107986522 ; TRAF3IP2-AS1
0.925 0.040 6 111526988 intron variant A/T snv 9.7E-02 3
rs2024092
SBNO2
0.827 0.120 19 1124032 intron variant G/A snv 0.24 0.26 6
rs561722
NXPE2
1.000 0.040 11 114516108 upstream gene variant C/T snv 0.35 2
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 15
rs7848647
TNFSF15
0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74 6
rs11554257 1.000 0.040 9 114842790 upstream gene variant T/C snv 0.13 2
rs11641184
LITAF
0.925 0.040 16 11610795 intron variant C/A snv 0.36 3
rs11064881
CIT
1.000 0.040 12 119709120 intron variant G/A snv 5.0E-02 3
rs7657746
KIAA1109
0.925 0.040 4 122240464 intron variant A/G snv 0.24 3
rs111456533
EEF1AKMT2
1.000 0.040 10 124750812 intron variant G/A snv 0.18 2
rs1893217
PTPN2
0.742 0.440 18 12809341 intron variant A/G snv 0.12 10
rs11221332
ETS1
0.763 0.280 11 128511079 intron variant C/A;T snv 8
rs6651252
LINC00824
0.790 0.200 8 128554935 intron variant T/C snv 0.19 8
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 11
rs12103
INTS11 ; PUSL1 ; MIR6727
0.925 0.040 1 1312114 synonymous variant T/A;C;G snv 0.56 3
rs17622378
IRF1-AS1
0.790 0.200 5 132442760 intron variant A/G snv 0.28 8
rs254560
C5orf66
1.000 0.040 5 135107916 intron variant G/A snv 0.32 2