Disease: Lupus Erythematosus, Systemic
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs7731626
ANKRD55
0.716 0.240 5 56148856 intron variant G/A snv 0.30 15
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 15
rs12598357 0.724 0.240 16 28329624 intergenic variant A/G snv 0.43 15
rs2075184 0.724 0.240 2 102464132 intergenic variant T/C snv 0.78 14
rs2836882 0.724 0.240 21 39094644 intergenic variant G/A snv 0.23 15
rs62131887 0.724 0.240 19 10476920 intergenic variant C/T snv 0.37 14
rs9271366 0.807 0.240 6 32619077 intergenic variant G/A snv 0.86 5
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 12
rs55705316 0.724 0.240 1 206760172 regulatory region variant T/A;G snv 14
rs7672495 0.724 0.240 4 4990640 regulatory region variant T/C snv 0.21 14
rs7831697 0.724 0.240 8 137124061 regulatory region variant T/A;C;G snv 14
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 7
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 15
rs602662
LOC105447645 ; FUT2
0.716 0.280 19 48703728 missense variant G/A snv 0.40 0.47 15
rs1689510
SUOX
0.724 0.240 12 56002984 non coding transcript exon variant G/C snv 0.25 16
rs17466626
LOC105369736 ; LRRK2
0.724 0.240 12 40366829 non coding transcript exon variant A/G snv 1.7E-02 14
rs17885785
IGF2 ; IGF2-AS ; INS-IGF2
0.724 0.240 11 2146620 non coding transcript exon variant C/T snv 0.14 14
rs117372389
NKD1
0.724 0.240 16 50634166 3 prime UTR variant G/T snv 1.1E-02 14
rs4625
DAG1
0.716 0.280 3 49534707 3 prime UTR variant A/G snv 0.30 17
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs3024505 0.790 0.320 1 206766559 upstream gene variant G/A snv 0.11 5
rs36051895 0.716 0.240 9 4981866 upstream gene variant G/T snv 0.25 15
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 11