Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs11879293
SMARCA4
0.882 0.120 19 10961934 intron variant G/A;C;T snv 4
rs1044250
ANGPTL4
0.807 0.240 19 8371280 missense variant C/T snv 0.30 0.29 12
rs864745
JAZF1
0.763 0.320 7 28140937 intron variant T/C snv 0.41 12
rs2516839
USF1
0.732 0.320 1 161043331 5 prime UTR variant C/T snv 0.49 14
rs184003
AGER
0.724 0.400 6 32182519 intron variant C/A snv 0.12 0.12 15
rs2794521
CRP
0.742 0.480 1 159715306 upstream gene variant C/T snv 0.78 15
rs619586
MALAT1
0.724 0.360 11 65498698 non coding transcript exon variant A/G snv 5.9E-02 3.3E-02 15
rs17251221
CASR
0.724 0.360 3 122274400 intron variant A/G snv 0.11 18
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs1870377
KDR
0.695 0.520 4 55106807 missense variant T/A snv 0.22 0.20 25
rs6505162
NSRP1 ; MIR3184 ; MIR423
0.695 0.320 17 30117165 5 prime UTR variant A/C;T snv 0.50; 3.1E-05 25
rs11536889
TLR4
0.658 0.560 9 117715853 3 prime UTR variant G/C snv 0.11 27
rs11556218
IL16
0.653 0.600 15 81305928 missense variant T/G snv 9.6E-02 0.12 27
rs568408
IL12A ; IL12A-AS1
0.649 0.600 3 159995680 3 prime UTR variant G/A snv 0.16 29
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs1800206
PPARA
0.641 0.640 22 46218377 missense variant C/G snv 4.3E-02 4.2E-02 35
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76 38
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs3732379
CX3CR1
0.637 0.680 3 39265765 missense variant C/T snv 0.22 0.22 38
rs3856806
PPARG
0.637 0.440 3 12434058 synonymous variant C/T snv 0.13 0.11 41
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs1050450
GPX1
0.623 0.600 3 49357401 missense variant G/A snv 0.28 0.30 43
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46