Disease: Inflammatory Bowel Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs113010081 0.925 0.160 3 46415921 downstream gene variant T/C snv 7.3E-02 3
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 17
rs2542151 0.763 0.480 18 12779948 upstream gene variant G/T snv 0.83 11
rs3024505 0.790 0.320 1 206766559 upstream gene variant G/A snv 0.11 10
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs917997 0.701 0.480 2 102454108 downstream gene variant T/A;C snv 20
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs13306190
APOB
0.807 0.320 2 21032408 missense variant G/A;C;T snv 1.7E-04; 8.0E-06 7
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs2043211
CARD8
0.653 0.480 19 48234449 missense variant A/T snv 0.33 0.29 29
rs4804803
CD209
0.732 0.360 19 7747847 upstream gene variant A/G snv 0.26 15
rs727088
CD226
0.790 0.400 18 69863203 3 prime UTR variant G/A snv 0.47 8
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 46
rs516246
FUT2 ; LOC105447645
0.925 0.160 19 48702915 intron variant C/T snv 0.38 0.45 10
rs601338
FUT2 ; LOC105447645
0.742 0.280 19 48703417 stop gained G/A snv 0.38 0.45 19
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs4676410
GPR35
0.716 0.240 2 240624322 intron variant G/A snv 0.26 17
rs477515
HLA-DRB1
0.790 0.400 6 32601914 intergenic variant G/A snv 0.27 10
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 33
rs3024493
IL19 ; IL10
0.776 0.280 1 206770623 intron variant C/A;T snv 0.11 9
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46