DisGeNET - a database of gene-disease associations

List of associated variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs7901695	TCF7L2	0.851	0.160	10	112994329	intron variant	T/C	snv		0.34	2
rs4506565	TCF7L2	0.790	0.280	10	112996282	intron variant	A/G;T	snv			4
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			8
rs7904519	TCF7L2	0.763	0.240	10	113014168	intron variant	A/G	snv		0.55	2
rs11196192	TCF7L2	1.000	0.080	10	113022528	intron variant	T/G	snv		6.1E-02	1
rs12243326	TCF7L2	0.925	0.160	10	113029056	intron variant	T/C	snv		0.27	1
rs7900150	TCF7L2	0.882	0.160	10	113034064	intron variant	T/A;C	snv		0.54	1
rs7100927	TCF7L2	0.925	0.080	10	113036289	intron variant	A/G	snv		0.54	1
rs10885409	TCF7L2	1.000	0.080	10	113048313	intron variant	T/C	snv		0.54	1
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv			3
rs290481	TCF7L2	0.827	0.200	10	113164066	intron variant	C/T	snv		0.20	1
rs2293855	MTMR9	0.851	0.120	8	11319901	non coding transcript exon variant	G/A	snv		0.35	1
rs2476601	AP4B1-AS1 ; PTPN22	0.498	0.800	1	113834946	missense variant	A/G	snv	0.93	0.93	13
rs964184	ZPR1	0.716	0.440	11	116778201	3 prime UTR variant	G/C	snv		0.82	12
rs2075290	ZPR1	0.882	0.160	11	116782580	intron variant	C/G;T	snv			7
rs3135506	APOA5	0.708	0.400	11	116791691	missense variant	G/A;C	snv	3.0E-05; 6.8E-02		1
rs662799	APOA5	0.689	0.480	11	116792991	upstream gene variant	G/A	snv		0.90	6
rs13266634	SLC30A8 ; LOC105375716	0.724	0.480	8	117172544	missense variant	C/A;T	snv	0.29		3
rs3802177	SLC30A8 ; LOC105375716	1.000	0.080	8	117172786	3 prime UTR variant	G/A	snv		0.24	3
rs11558471	LOC105375716 ; SLC30A8	1.000	0.080	8	117173494	3 prime UTR variant	A/G	snv		0.25	5
rs1801131	MTHFR	0.535	0.840	1	11794419	missense variant	T/G	snv	0.29	0.26	1
rs1801133	MTHFR	0.472	0.880	1	11796321	missense variant	G/A	snv	0.31	0.27	3
rs2073618	COLEC10 ; TNFRSF11B	0.716	0.480	8	118951813	missense variant	G/C	snv	0.52	0.60	1
rs10886471	GRK5	1.000	0.080	10	119389891	intron variant	C/T	snv		0.39	1
rs10923931	NOTCH2	0.925	0.120	1	119975336	intron variant	G/T	snv		0.17	2