Disease: Malignant neoplasm of breast
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1057519927
PIK3CA
0.716 0.240 3 179218295 missense variant A/C;G;T snv 19
rs1057519981
TP53
0.689 0.440 17 7674251 missense variant A/C;G;T snv 22
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913281
PIK3CA
0.623 0.520 3 179234296 missense variant C/T snv 37
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs17748
TREH ; PHLDB1
0.827 0.080 11 118657714 3 prime UTR variant C/T snv 0.18 5
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs1801320
RAD51 ; RAD51-AS1
0.742 0.160 15 40695330 5 prime UTR variant G/C snv 0.12 15
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs375874539
TP53
0.732 0.320 17 7674237 missense variant G/A;C snv 15
rs397517201
PIK3CA
0.732 0.240 3 179218307 missense variant A/C;G;T snv 16
rs587777790
PIK3CA
0.732 0.280 3 179199690 missense variant G/A snv 14
rs587780071
TP53
0.732 0.240 17 7674951 missense variant G/A snv 15
rs760043106
TP53
0.645 0.440 17 7674947 missense variant A/C;G;T snv 32
rs78378222
TP53
0.662 0.360 17 7668434 3 prime UTR variant T/G snv 8.3E-03 37
rs786201057
TP53
0.677 0.400 17 7675995 missense variant G/A;C;T snv 24
rs786204929
PTEN
0.752 0.200 10 87933144 stop gained G/A;T snv 12