Disease: Hepatitis B
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1054690270
LOC101928953 ; GPT
0.827 0.160 8 144505907 frameshift variant CT/- delins 5
rs10932029
ICOS ; LOC101927840
0.827 0.200 2 203937045 intron variant T/A;C snv 5
rs13347
CD44
0.763 0.320 11 35231725 3 prime UTR variant C/A;T snv 12
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs28934571
TP53
0.645 0.360 17 7674216 missense variant C/A;G snv 31
rs3129859 0.827 0.320 6 32433162 intergenic variant G/C;T snv 5
rs3775290
TLR3
0.742 0.280 4 186083063 missense variant C/A;T snv 0.30 15
rs3820998
TANK ; LOC105373719
0.882 0.120 2 161138615 intron variant C/A;T snv 3
rs4656942
CD244
0.851 0.160 1 160861258 intron variant G/A;C;T snv 4
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs747432300
GPT ; LOC101928953
0.925 0.120 8 144504357 missense variant C/A;T snv 8.1E-06; 1.2E-04 2
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs2296651
SLC10A1
0.732 0.240 14 69778476 missense variant G/A snv 6.3E-03 2.5E-03 13
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 54
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs1358379
LINC00472 ; MIR30A
0.882 0.160 6 71403739 intron variant T/C snv 6.2E-02 3
rs2233682
PIN1
0.827 0.240 19 9838476 synonymous variant G/A snv 3.7E-02 6.3E-02 5
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226