Disease: Arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10036748
TNIP1
0.752 0.360 5 151078585 intron variant C/A;T snv 11
rs10491322
PPP2CA
0.925 0.120 5 134194449 3 prime UTR variant A/G snv 9.5E-02 3
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs1061622
TNFRSF1B
0.633 0.760 1 12192898 missense variant T/G snv 0.22 0.22 33
rs10911363
SMG7 ; NCF2
0.925 0.120 1 183580622 intron variant G/T snv 0.30 2
rs11168268
VDR
0.925 0.120 12 47858029 intron variant G/A snv 0.57 2
rs1143679
ITGAM
0.732 0.520 16 31265490 missense variant G/A snv 9.7E-02 0.11 14
rs12150220
NLRP1
0.724 0.360 17 5582047 missense variant A/T snv 0.37 0.33 14
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1234315
TNFSF4
0.807 0.400 1 173209324 upstream gene variant C/T snv 0.57 6
rs13277113
BLK
0.695 0.520 8 11491677 intron variant G/A snv 0.25 18
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs20541
IL13 ; TH2LCRR
0.585 0.720 5 132660272 missense variant A/G snv 0.72 0.77 52
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs2230926
TNFAIP3
0.662 0.440 6 137874929 missense variant T/C;G snv 4.0E-06; 5.4E-02 27
rs2234693
ESR1
0.555 0.680 6 151842200 intron variant T/C snv 0.47 77
rs2248098
VDR
0.925 0.120 12 47859573 intron variant A/G;T snv 4
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs2670660
NLRP1
0.708 0.400 17 5615686 intron variant A/G snv 0.41 15
rs28940580
MEFV
0.742 0.560 16 3243447 missense variant C/A;G;T snv 1.0E-04; 8.0E-06 17
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs3024498
IL10
0.790 0.360 1 206768184 3 prime UTR variant T/C snv 0.20 7
rs3743930
MEFV
0.611 0.720 16 3254626 missense variant C/G;T snv 7.1E-02 43
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs3890733
VDR
0.882 0.120 12 47895590 intron variant C/T snv 0.27 3