Disease: Rheumatoid Arthritis
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217393
AP4B1-AS1
0.851 0.160 1 113891324 intron variant G/A snv 0.42 4
rs17849502
NCF2 ; SMG7
0.827 0.240 1 183563445 missense variant G/A;C;T snv 4.0E-06; 4.0E-06; 3.4E-02 5
rs2422345
LOC100506023 ; TNFSF4
0.851 0.160 1 173368608 upstream gene variant G/A snv 0.63 4
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs6659932
IL12RB2
0.827 0.240 1 67336688 intron variant A/C snv 0.81 4
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 25
rs10174238
STAT4
0.724 0.200 2 191108308 intron variant G/A snv 0.70 12
rs11889341
STAT4
0.732 0.480 2 191079016 intron variant C/T snv 0.21 3
rs13389408
STAT4
0.851 0.160 2 191068557 3 prime UTR variant T/C snv 7.4E-02 4
rs744600 0.851 0.160 2 190700031 intron variant G/T snv 0.60 4
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 9
rs7579944 0.882 0.200 2 30222160 intergenic variant T/C;G snv 5
rs112846137 0.851 0.160 3 160595133 intergenic variant G/T snv 5.3E-02 4
rs35677470
DNASE1L3
0.807 0.160 3 58197909 missense variant G/A;C snv 4.8E-02; 4.0E-06 5
rs13101828
DGKQ
0.851 0.160 4 971932 intron variant A/G snv 0.43 6
rs2431098 0.827 0.240 5 160460329 intron variant A/G;T snv 5
rs4921283 0.925 0.120 5 160443604 intron variant G/A snv 0.52 2
rs4958880
TNIP1
0.851 0.160 5 151058916 intron variant C/A;G snv 4
rs7731626
ANKRD55
0.716 0.240 5 56148856 intron variant G/A snv 0.30 15
rs5029924
TNFAIP3 ; WAKMAR2
0.851 0.200 6 137866361 intron variant C/T snv 0.13 2
rs58721818 0.851 0.160 6 137922602 regulatory region variant C/G;T snv 4
rs6568431
ATG5
0.790 0.320 6 106140931 intron variant A/C snv 0.61 2
rs6920220 0.742 0.440 6 137685367 intron variant G/A snv 0.16 4
rs802791
ATG5
0.851 0.160 6 106121395 intron variant T/C snv 0.75 4
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02 7