Disease: Malignant Neoplasms
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs13252298
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.827 0.160 8 127082911 non coding transcript exon variant A/G snv 0.24 7
rs16901946
PCAT1 ; CASC19 ; PRNCR1
0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 8
rs1859168
HOTTIP
0.790 0.160 7 27202740 non coding transcript exon variant A/C;G;T snv 9
rs2227473
IL22 ; LOC105369818
0.851 0.160 12 68255258 upstream gene variant C/T snv 0.20 6
rs2607775
XPC ; LSM3
0.807 0.160 3 14178595 5 prime UTR variant C/G snv 0.42 0.43 8
rs56250509
MLH1
0.790 0.160 3 37014530 missense variant T/C snv 2.0E-05 10
rs6682925
C1orf141 ; IL23R
0.776 0.160 1 67165579 intron variant C/T snv 0.47 11
rs779315943
DNMT3A
0.882 0.160 2 25247708 frameshift variant TTTCC/- del 5
rs1468063
FAS
0.851 0.200 10 89015534 3 prime UTR variant C/T snv 0.17 0.17 6
rs201745983
ALDH2
0.752 0.200 12 111783219 missense variant G/A snv 6.8E-05 7.7E-05 14
rs2293303
CTNNB1
0.827 0.200 3 41239336 synonymous variant C/T snv 3.2E-02 1.2E-02 7
rs2854746
IGFBP3
0.752 0.200 7 45921046 missense variant G/A;C;T snv 0.38 13
rs3747093
YDJC
0.732 0.200 22 21630090 upstream gene variant G/A snv 0.32 14
rs629367
MIR100HG ; MIRLET7A2
0.776 0.200 11 122146306 intron variant C/A snv 0.88 11
rs773919809
MGMT
0.763 0.200 10 129766957 missense variant C/T snv 2.0E-05 13
rs7853346
PTENP1-AS ; PTENP1
0.851 0.200 9 33676096 non coding transcript exon variant C/G snv 0.28; 1.2E-05 0.32 6
rs937283
MDM2
0.716 0.200 12 68808384 5 prime UTR variant A/G snv 0.37 19
rs1016343
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 5
rs1047972
AURKA
0.716 0.240 20 56386407 missense variant T/C snv 0.85 0.84 19
rs16999593
DNMT1
0.742 0.240 19 10180505 missense variant T/C snv 2.4E-02 9.6E-03 14
rs2227869
ERCC5 ; BIVM-ERCC5
0.790 0.240 13 102862735 missense variant G/A;C snv 4.3E-02 9
rs2302254
NME1-NME2 ; NME1
0.752 0.240 17 51153539 5 prime UTR variant C/T snv 0.22 15
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs2976392
JRK ; PSCA
0.724 0.240 8 142681514 3 prime UTR variant G/A snv 0.46 0.45 15
rs3734254
PPARD
0.752 0.240 6 35427233 3 prime UTR variant C/T snv 0.69 13