Disease: Stomach Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1870377
KDR
0.695 0.520 4 55106807 missense variant T/A snv 0.22 0.20 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs112445441
KRAS
0.658 0.400 12 25245347 missense variant C/A;G;T snv 32
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs121913530
KRAS
0.583 0.640 12 25245351 missense variant C/A;G;T snv 63
rs712
KRAS
0.677 0.360 12 25209618 3 prime UTR variant A/C snv 0.46 24
rs6218
LINC02456 ; HELLPAR ; IGF1
0.732 0.440 12 102399855 3 prime UTR variant A/G snv 2.1E-02 13
rs41274221
MCM7 ; MIR106B ; MIR25 ; MIR93
0.851 0.160 7 100093577 mature miRNA variant C/T snv 6.4E-05 4.9E-05 6
rs1353702185
MDM2
0.550 0.720 12 68839311 missense variant C/G snv 4.0E-06 79
rs629367
MIR100HG ; MIRLET7A2
0.776 0.200 11 122146306 intron variant C/A snv 0.88 11
rs1536309
MIR146B
0.851 0.160 10 102435445 upstream gene variant A/G snv 0.32 7
rs9589207
MIR17HG ; MIR92A1 ; MIR19B1 ; MIR20A ; MIR19A
0.925 0.080 13 91351335 mature miRNA variant G/A;C snv 5.4E-03; 4.0E-06 4
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs17576
MMP9
0.557 0.760 20 46011586 missense variant A/G snv 0.39 0.36 73
rs2303428
MSH2
0.776 0.240 2 47476361 splice region variant T/A;C;G snv 4.0E-06; 0.12 9
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs3790843
NR5A2
0.827 0.160 1 200041696 intron variant C/T snv 0.29 7
rs1760944
OSGEP ; APEX1
0.672 0.480 14 20454990 non coding transcript exon variant T/C;G snv 26
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs3130
PROM1 ; FGFBP2
0.882 0.080 4 15968315 3 prime UTR variant T/A;C snv 6
rs5361
SELE ; C1orf112
0.623 0.720 1 169731919 missense variant T/G snv 8.3E-02; 8.0E-06 7.8E-02 47
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16