Disease: Malignant neoplasm of breast
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2227983
EGFR
0.658 0.520 7 55161562 missense variant G/A;C;T snv 0.29 31
rs486907
RNASEL
0.667 0.360 1 182585422 missense variant C/T snv 0.31 0.28 31
rs11549467
HIF1A ; HIF1A-AS3
0.653 0.400 14 61740857 missense variant G/A snv 8.9E-03 7.0E-03 30
rs17577
SLC12A5-AS1 ; MMP9
0.649 0.520 20 46014472 missense variant G/A;C snv 0.16 30
rs61764370
KRAS
0.662 0.320 12 25207290 3 prime UTR variant A/C snv 6.2E-02 29
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs1760944
OSGEP ; APEX1
0.672 0.480 14 20454990 non coding transcript exon variant T/C;G snv 26
rs6505162
NSRP1 ; MIR3184 ; MIR423
0.695 0.320 17 30117165 5 prime UTR variant A/C;T snv 0.50; 3.1E-05 25
rs712
KRAS
0.677 0.360 12 25209618 3 prime UTR variant A/C snv 0.46 24
rs2249825
HMGB1
0.695 0.440 13 30463766 5 prime UTR variant G/A;C;T snv 22
rs1057519975
TP53
0.649 0.480 17 7675209 missense variant A/C;G;T snv 21
rs523349
SRD5A2
0.689 0.440 2 31580636 missense variant G/A;C;T snv 0.66; 4.9E-06 21
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs2981582
FGFR2
0.695 0.360 10 121592803 intron variant A/G snv 0.58 20
rs4244285
CYP2C19
0.695 0.360 10 94781859 synonymous variant G/A;C snv 0.18 18
rs12190287
TCF21
0.708 0.280 6 133893387 3 prime UTR variant C/G;T snv 17
rs1412125
HMGB1
0.724 0.360 13 30467458 intron variant C/G;T snv 17
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs371074389
LOC112268426 ; CXCR4
0.732 0.320 2 136115226 synonymous variant C/T snv 4.0E-06 4.2E-05 16
rs760043106
TP53
0.645 0.440 17 7674947 missense variant A/C;G;T snv 16
rs766914563
LOC112268426 ; CXCR4
0.732 0.320 2 136115082 synonymous variant C/T snv 7.0E-06 16
rs781172058
CXCR4
0.732 0.320 2 136115340 synonymous variant C/T snv 4.0E-06 16
rs9350
EXO1
0.742 0.240 1 241885372 missense variant C/T snv 0.21 0.19 16
rs13387042
LOC105373874 ; LOC101928278
0.732 0.280 2 217041109 intergenic variant A/G snv 0.44 15
rs1800372
TP53
0.752 0.240 17 7674892 synonymous variant T/A;C snv 1.3E-02 15