Disease: melanoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs12203592
IRF4
0.649 0.320 6 396321 intron variant C/T snv 0.10 38
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16 17
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 42
rs1512268
LOC107986930
0.851 0.160 8 23668950 intergenic variant T/C snv 0.50 6
rs11571833
BRCA2
0.608 0.360 13 32398489 stop gained A/T snv 6.6E-03 6.0E-03 43
rs121913254
NRAS
0.658 0.440 1 114713909 stop gained G/A;C;T snv 31
rs121913323
STK11
1.000 0.040 19 1220416 stop gained C/T snv 2
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs34301344
ARL11
0.689 0.400 13 49630893 stop gained G/A snv 9.7E-03 7.9E-03 22
rs387906659
AKT2
0.742 0.280 19 40257052 stop gained C/A;T snv 14
rs755100942
ARL11
0.724 0.320 13 49630894 stop gained G/A snv 4.2E-06 17
rs1024708183
MAP2K7
0.925 0.040 19 7909761 missense variant A/G snv 4
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs104894094
CDKN2A
0.763 0.200 9 21971058 missense variant C/A;G;T snv 8.5E-06; 4.3E-06 12
rs104894229
LRRC56 ; HRAS
0.564 0.600 11 534289 missense variant C/A;G;T snv 73
rs104894230
HRAS ; LRRC56
0.564 0.600 11 534288 missense variant C/A;G;T snv 73
rs1052133
OGG1 ; CAMK1
0.476 0.800 3 9757089 missense variant C/G snv 0.27 0.22 147
rs1057519695
NRAS
0.641 0.520 1 114713907 missense variant TT/CA;CC mnv 35
rs1057519702
KIT
1.000 0.040 4 54726020 missense variant T/C snv 2
rs1057519710
KIT
0.695 0.280 4 54733166 missense variant G/C;T snv 22
rs1057519730
MAP2K1
1.000 0.040 15 66436786 missense variant T/A;G snv 2
rs1057519742
GNA11
0.827 0.160 19 3118944 missense variant A/C;T snv 7
rs1057519804
AKT1
1.000 0.040 14 104776711 missense variant G/T snv 2