DisGeNET - a database of gene-disease associations

List of shared variants

Neoplasms, C0027651

Disease: Non-Small Cell Lung Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs7040869		1.000	0.080	9	99072866	downstream gene variant	G/A	snv		0.11	2
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs201661522	ABCB1	1.000	0.080	7	87539293	missense variant	A/G	snv	6.4E-05	1.0E-04	2
rs2032582	ABCB1	0.538	0.800	7	87531302	missense variant	A/C;T	snv	0.54; 3.8E-02		97
rs3740066	ABCC2	0.724	0.440	10	99844450	missense variant	C/G;T	snv	2.4E-05; 0.34		20
rs717620	ABCC2	0.763	0.240	10	99782821	5 prime UTR variant	C/T	snv	0.17	0.15	10
rs2231142	ABCG2	0.583	0.680	4	88131171	missense variant	G/C;T	snv	4.0E-06; 0.12		56
rs2070600	AGER	0.561	0.760	6	32183666	missense variant	C/T	snv	5.3E-02	3.6E-02	82
rs121434592	AKT1	0.595	0.640	14	104780214	missense variant	C/T	snv	4.0E-06		54
rs1057519698	ALK	0.827	0.120	2	29222347	missense variant	A/G;T	snv			8
rs1057519783	ALK	0.851	0.080	2	29220747	missense variant	C/T	snv			10
rs1057519784	ALK	0.827	0.080	2	29220765	missense variant	G/T	snv			7
rs281864719	ALK	0.763	0.240	2	29220831	missense variant	A/C;G;T	snv			14
rs751306825	ALK	0.925	0.080	2	29220759	missense variant	G/A;T	snv	4.0E-06		4
rs863225283	ALK	0.925	0.080	2	29213993	missense variant	A/C	snv			4
rs1130409	APEX1	0.555	0.720	14	20456995	missense variant	T/A;C;G	snv	4.0E-06; 4.0E-06; 0.42		72
rs2245214	ATG5	0.827	0.240	6	106214866	intron variant	C/G	snv		0.42	6
rs2227928	ATR	0.851	0.200	3	142562770	missense variant	A/G	snv	0.55	0.63	6
rs767935771	AXL	0.827	0.080	19	41259690	missense variant	T/C	snv	1.6E-05	5.6E-05	6
rs1800469	B9D2 ; TGFB1	0.547	0.760	19	41354391	intron variant	A/G	snv		0.69	78
rs1564483	BCL2	1.000	0.080	18	63127421	3 prime UTR variant	C/T	snv		0.22	4
rs2279115	BCL2	0.724	0.320	18	63319604	5 prime UTR variant	G/A;T	snv			18
rs1042489	BIRC5	0.851	0.160	17	78224125	3 prime UTR variant	T/C	snv		0.40	5
rs8073069	BIRC5	0.807	0.200	17	78213692	upstream gene variant	G/C	snv		0.33	7
rs17655	BIVM-ERCC5 ; ERCC5	0.597	0.560	13	102875652	missense variant	G/C	snv	0.28	0.30	52