Disease: Malignant neoplasm of colon and/or rectum
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs1535989 0.925 0.080 13 105370372 intergenic variant A/G;T snv 4
rs16260
CDH1
0.716 0.440 16 68737131 upstream gene variant C/A snv 0.24 19
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs1800682
ACTA2 ; FAS
0.637 0.440 10 88990206 non coding transcript exon variant A/G snv 0.54 32
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs187115
CD44
0.695 0.320 11 35154612 intron variant T/C snv 0.37 22
rs1990172
MACC1
0.827 0.120 7 20164512 intron variant A/C snv 0.27 6
rs2070804
HSPB1
0.925 0.080 7 76304395 downstream gene variant T/G snv 0.13 3
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs2279744
MDM2
0.605 0.640 12 68808800 intron variant T/G snv 0.31 48
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs2735383
OSGIN2 ; NBN
0.708 0.360 8 89935041 3 prime UTR variant C/G snv 0.31 18
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs2854744
IGFBP3
0.695 0.520 7 45921476 intron variant G/T snv 0.48 20
rs2946834
LINC02456 ; HELLPAR
0.807 0.200 12 102394036 non coding transcript exon variant A/G snv 0.63 7
rs35502531
MLH1
0.827 0.160 3 37047639 missense variant AA/GC mnv 8
rs35767
IGF1 ; LOC105369944
0.763 0.360 12 102481791 upstream gene variant A/C;G;T snv 13
rs3761548
FOXP3
0.620 0.680 X 49261784 intron variant G/A;T snv 42
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26