DisGeNET - a database of gene-disease associations

List of shared variants

Neoplasms, C0027651

Disease: Malignant neoplasm of lung

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10079250	CSF1R	0.827	0.120	5	150070569	missense variant	T/C	snv	9.9E-02	8.6E-02	7
rs1057519697	ALK	0.776	0.120	2	29220830	missense variant	A/C	snv			12
rs1057519698	ALK	0.827	0.120	2	29222347	missense variant	A/G;T	snv			8
rs1205454520	KLLN ; PTEN	0.763	0.120	10	87864059	5 prime UTR variant	-/G	delins		7.2E-06	10
rs12918952	WWOX	0.851	0.120	16	78386878	missense variant	G/A;C;T	snv			7
rs1805076	PPP2R1B	0.851	0.120	11	111764842	missense variant	C/T	snv	6.5E-03	7.0E-03	7
rs1864182	ATG10	0.827	0.120	5	82253421	missense variant	C/A;G	snv	0.59	0.47	6
rs2071203	SEMA3B	0.827	0.120	3	50274469	missense variant	C/T	snv	0.12	9.9E-02	6
rs2279574	DUSP6	0.827	0.120	12	89351700	missense variant	C/A;T	snv	0.52		8
rs28382575	MMP11	0.851	0.120	22	23783502	synonymous variant	T/C	snv	2.2E-02	1.8E-02	5
rs3136797	POLB	0.827	0.120	8	42369287	missense variant	C/G	snv	1.1E-02	1.1E-02	10
rs3743073	CHRNA3	0.807	0.120	15	78617197	intron variant	G/T	snv		0.61	11
rs397517108	EGFR ; EGFR-AS1	0.790	0.120	7	55181312	missense variant	GC/TT	mnv			9
rs4769793		0.807	0.120	13	29985289	intergenic variant	G/C	snv			8
rs748491031	EGFR	0.827	0.120	7	55200384	stop gained	C/G;T	snv	1.2E-05		8
rs1046282	ERCC1 ; CD3EAP ; PPP1R13L	0.776	0.160	19	45407414	3 prime UTR variant	A/G	snv		0.30	10
rs1057519911	MAPK1	0.776	0.160	22	21772875	missense variant	C/T	snv			10
rs121913387	CDKN2A	0.827	0.160	9	21971187	stop gained	G/A;C	snv	4.6E-06		6
rs121913444	EGFR	0.724	0.160	7	55191831	missense variant	T/A;C;G	snv			18
rs121913465	EGFR ; EGFR-AS1	0.763	0.160	7	55181312	missense variant	G/T	snv			11
rs1225976306	BRAF ; LOC105375536	0.807	0.160	7	140924673	missense variant	C/T	snv	9.3E-06		8
rs1273593548	PIK3CG	0.716	0.160	7	106867593	missense variant	T/G	snv	8.4E-06		19
rs1430452530	HIF1A-AS3 ; HIF1A	0.851	0.160	14	61721518	missense variant	A/G	snv	4.0E-06		5
rs1799732	DRD2 ; LOC105369501	0.790	0.160	11	113475529	intron variant	-/G	delins			11
rs267605076	TP53	0.851	0.160	17	7674859	missense variant	C/A;T	snv	4.0E-06		6