Disease: Gilles de la Tourette syndrome
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs6313
HTR2A
0.562 0.640 13 46895805 synonymous variant G/A snv 0.41 0.40 82
rs25531
SLC6A4 ; LOC105371720
0.581 0.520 17 30237328 upstream gene variant T/C snv 0.18 72
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs6311
HTR2A
0.645 0.640 13 46897343 upstream gene variant C/T snv 0.40 41
rs746682028
BDNF ; BDNF-AS
0.645 0.480 11 27658414 missense variant C/A;T snv 4.0E-06; 4.0E-06 36
rs6296
HTR1B ; LOC105377864
0.732 0.160 6 77462543 synonymous variant C/G snv 0.31 0.27 23
rs9357271
BTBD9
0.776 0.160 6 38398097 intron variant T/C snv 0.38 8
rs25532
LOC105371720 ; SLC6A4
0.851 0.160 17 30237152 upstream gene variant G/A snv 6.3E-02 5
rs28914832
SLC6A4
0.925 0.120 17 30211356 missense variant T/C;G snv 7.4E-04 3
rs11149058
LOC105370269
0.925 0.120 13 76978136 downstream gene variant T/A;C;G snv 2
rs2289664
CDH2
0.925 0.120 18 27952340 missense variant T/C snv 2.5E-02 2.0E-02 2
rs4271390
NECTIN1
0.925 0.120 11 119655426 intron variant T/C snv 0.68 2
rs4988462
POU1F1
0.925 0.120 3 87264203 intron variant C/T snv 0.31 2