Disease: Osteoarthritis, Knee
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs2234693
ESR1
0.555 0.680 6 151842200 intron variant T/C snv 0.47 77
rs143383
GDF5
0.724 0.320 20 35438203 5 prime UTR variant G/A snv 0.47 17
rs3117582
BAG6 ; APOM
0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 14
rs419598
IL1RN
0.742 0.280 2 113129630 synonymous variant T/C snv 0.26 0.21 13
rs2820443 0.882 0.120 1 219580167 regulatory region variant T/C snv 0.23 8
rs9930333
FTO
0.882 0.120 16 53766065 intron variant T/C;G snv 7
rs10116772
GLIS3
0.882 0.080 9 4290541 intron variant C/A;T snv 4
rs11177
SNORD136 ; GNL3 ; SNORD19 ; PBRM1
0.851 0.080 3 52687289 missense variant G/A snv 0.38 0.33 4
rs2820436
LYPLAL1-AS1
0.882 0.040 1 219467338 intergenic variant A/C;G snv 4
rs6976
GNL3 ; GLT8D1
0.851 0.080 3 52694788 3 prime UTR variant C/T snv 0.38 0.33 4
rs10492367 0.882 0.040 12 27862037 regulatory region variant G/T snv 0.12 3
rs10948172
SUPT3H ; LOC101929770
0.882 0.040 6 44809954 intron variant A/G snv 0.27 3
rs12901499
SMAD3
0.882 0.040 15 67078107 intron variant G/A snv 0.45 3
rs2622873
COL11A1
0.882 0.040 1 103000497 intron variant T/C;G snv 3
rs3774354
ITIH1
0.882 0.080 3 52783659 intron variant G/A snv 0.31 3
rs532464664
CHADL
0.882 0.040 22 41238083 frameshift variant -/GCCCGCGC delins 4.8E-03 1.2E-02 3
rs75621460
TGFB1
0.882 0.040 19 41327879 intron variant G/A snv 2.0E-02 3
rs10758594
GLIS3
0.925 0.040 9 4295583 intron variant A/G snv 0.45 2
rs11105466
LOC105369890
0.925 0.040 12 89933142 intron variant G/A snv 0.37 2
rs11456119
DYNC1I1
0.925 0.040 7 96089185 intron variant A/-;AA;AAA delins 2
rs11732213
SLBP
0.925 0.040 4 1702517 intron variant T/C snv 0.16 2