DisGeNET - a database of gene-disease associations

List of shared variants

Adenocarcinoma of lung (disorder), C0152013

Disease: Primary malignant neoplasm of lung

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs189037	ATM ; NPAT	0.689	0.400	11	108223106	5 prime UTR variant	G/A	snv		0.49	22
rs3184504	SH2B3 ; ATXN2	0.572	0.600	12	111446804	missense variant	T/A;C;G	snv	0.67		92
rs7086803	VTI1A	0.763	0.160	10	112738717	intron variant	G/A	snv		0.20	9
rs9387478	DCBLD1	0.851	0.080	6	117465017	intron variant	C/A;T	snv			4
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs1458974438	STK11	0.807	0.080	19	1206957	missense variant	G/A	snv			9
rs1026411	LOC105375751 ; PCAT1	0.827	0.080	8	127014165	intron variant	G/A;C	snv		0.25	5
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv		0.52	83
rs2853677	TERT	0.724	0.240	5	1287079	3 prime UTR variant	G/A	snv		0.63	19
rs2853676	TERT	0.667	0.560	5	1288432	intron variant	T/A;C	snv			29
rs4975616		0.763	0.320	5	1315545	downstream gene variant	G/A	snv		0.51	12
rs380286	CLPTM1L	0.776	0.200	5	1320132	intron variant	G/A	snv		0.47	8
rs401681	CLPTM1L	0.620	0.640	5	1321972	intron variant	C/T	snv		0.48	42
rs3816360	ARNTL	0.807	0.120	11	13346203	intron variant	T/C	snv		0.58	6
rs2290035	ARNTL	0.827	0.160	11	13386224	intron variant	T/A	snv		0.46	5
rs31489	CLPTM1L	0.763	0.320	5	1342599	intron variant	C/A	snv		0.41	10
rs121913377	BRAF	0.354	0.840	7	140753335	missense variant	CA/AT;TT	mnv			480
rs113488022	BRAF	0.351	0.840	7	140753336	missense variant	A/C;G;T	snv	4.0E-06		490
rs3733846	CARMN	0.807	0.200	5	149425059	non coding transcript exon variant	T/C	snv		0.19	6
rs3733845	CARMN	0.827	0.120	5	149425083	non coding transcript exon variant	G/A	snv		9.3E-02	5
rs4072037	MUC1	0.732	0.240	1	155192276	splice acceptor variant	C/A;T	snv	0.59		22
rs533748068	ARHGEF2 ; MIR6738	0.851	0.080	1	155950962	missense variant	C/A;T	snv	4.3E-06	7.0E-06	5
rs772399455	MYCNOS ; MYCN	0.851	0.080	2	15942096	missense variant	G/A;C	snv	4.0E-06		6
rs2910164	MIR3142HG ; MIR146A	0.447	0.880	5	160485411	mature miRNA variant	C/G	snv	0.71; 4.1E-06	0.70	193