DisGeNET - a database of gene-disease associations

List of shared variants

Adenocarcinoma of lung (disorder), C0152013

Disease: Smoking Behaviors

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs12914385	CHRNA3	0.790	0.160	15	78606381	intron variant	C/A;T	snv			8
rs1051730	CHRNA3	0.641	0.600	15	78601997	synonymous variant	G/A	snv	0.27	0.26	7
rs8034191	HYKK	0.695	0.440	15	78513681	intron variant	T/C	snv		0.27	5
rs1062980	IREB2	0.827	0.080	15	78500185	3 prime UTR variant	T/C	snv		0.39	4
rs13180	IREB2	0.851	0.160	15	78497146	synonymous variant	C/T	snv	0.54	0.51	4
rs4380028	MORF4L1	0.807	0.120	15	78818751	intron variant	C/T	snv		0.34	4
rs8042374	CHRNA3	0.807	0.200	15	78615690	intron variant	A/G	snv		0.29	4
rs11638372	LOC112268142 ; CHRNB4	0.925	0.080	15	78691217	intron variant	C/A;G;T	snv		0.28	3
rs12441998	CHRNB4	0.925	0.080	15	78637030	intron variant	G/A	snv		0.63	3
rs12594247	CHRNB4	0.925	0.080	15	78654291	intron variant	C/T	snv		0.14	3
rs12910984	CHRNA3	0.827	0.080	15	78599285	intron variant	G/A;C;T	snv			3
rs1316971	CHRNB4	0.925	0.080	15	78638168	intron variant	A/G;T	snv		0.62	3
rs1394371		0.925	0.080	15	78432127	intergenic variant	C/T	snv		0.22	3
rs17487514	CHRNB4 ; LOC112268142 ; RPL18P11	0.925	0.080	15	78661443	non coding transcript exon variant	C/T	snv		0.19	3
rs2036534	HYKK	0.827	0.080	15	78534606	3 prime UTR variant	T/C	snv		0.26	3
rs2656069	IREB2	0.882	0.080	15	78453365	intron variant	C/G;T	snv			3
rs3813565	LOC105370913 ; CHRNB4	0.851	0.080	15	78727268	splice region variant	G/A;T	snv			3
rs4887053		0.925	0.080	15	78420357	regulatory region variant	A/C;T	snv			3
rs578776	CHRNA3	0.742	0.240	15	78596058	3 prime UTR variant	G/A	snv		0.39	3
rs6495309	CHRNB4 ; CHRNA3	0.807	0.080	15	78622903	upstream gene variant	C/A;T	snv			3
rs6495314	CHRNB4 ; LOC112268142	0.925	0.080	15	78668187	intron variant	A/C	snv		0.35	3
rs8038920	CHRNB4 ; LOC112268142	0.925	0.080	15	78682203	intron variant	A/G	snv		0.62	3
rs938682	CHRNA3	0.851	0.080	15	78604205	intron variant	G/A	snv		0.72	3
rs16970006	LOC112268142 ; CHRNB4	1.000	0.040	15	78677917	intron variant	T/C	snv		8.7E-02	2
rs3885951	HYKK	1.000	0.040	15	78533575	missense variant	A/G	snv	7.5E-02	6.9E-02	2