Disease: High density lipoprotein measurement
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 35
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 35
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 30
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 26
rs79105258
CUX2
12 111280427 intron variant C/A;T snv 23
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 22
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 20
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 20
rs4803750
BCL3
0.807 0.240 19 44744370 upstream gene variant A/G snv 7.7E-02 19
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 19
rs1535
FADS2
0.752 0.240 11 61830500 intron variant A/G snv 0.31 18
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 18
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 17
rs562338 0.807 0.160 2 21065449 intergenic variant A/G snv 0.69 17
rs7703051 0.851 0.120 5 75329662 intron variant C/A snv 0.38 17
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs2954021 1.000 0.040 8 125469835 intron variant A/G snv 0.54 13
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 13
rs17696736
NAA25
0.827 0.240 12 112049014 intron variant A/G snv 0.30 12
rs7310615
SH2B3
0.882 12 111427245 intron variant C/G snv 0.67 12
rs11065987 0.807 0.280 12 111634620 intergenic variant A/G snv 0.29 10
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 10
rs651821
APOA5
0.851 0.360 11 116791863 5 prime UTR variant C/T snv 0.88 0.89 10
rs1128249
COBLL1
1.000 0.080 2 164672114 intron variant G/C;T snv 9