Disease: Papillary thyroid carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs11554290
NRAS
0.583 0.600 1 114713908 missense variant T/A;C;G snv 59
rs1057519695
NRAS
0.641 0.520 1 114713907 missense variant TT/CA;CC mnv 35
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs121913364
BRAF
0.641 0.520 7 140753334 missense variant T/C;G snv 4.0E-06 34
rs1057519834
NRAS
0.658 0.480 1 114713908 missense variant TG/CT mnv 31
rs1799939
RET
0.658 0.280 10 43114671 missense variant G/A;C;T snv 0.21 27
rs944289 0.742 0.200 14 36180040 upstream gene variant C/T snv 0.45 16
rs12794714
CYP2R1
0.708 0.360 11 14892029 synonymous variant G/A snv 0.41 0.35 15
rs4646536
CYP27B1
0.724 0.440 12 57764205 intron variant A/G snv 0.38 0.32 14
rs1991517
LOC101928462 ; TSHR
0.752 0.240 14 81144239 missense variant G/C snv 0.90 0.91 13
rs2296241
CYP24A1
0.763 0.200 20 54169680 synonymous variant G/A snv 0.49 0.51 12
rs10877012
CYP27B1 ; METTL1
0.763 0.280 12 57768302 intron variant G/C;T snv 10
rs927650
CYP24A1
0.763 0.240 20 54156202 intron variant T/A;C snv 9
rs2248137
CYP24A1
0.827 0.160 20 54173204 intron variant C/G snv 0.49 5
rs1800863
RET
0.851 0.160 10 43120185 synonymous variant C/A;G snv 1.6E-05; 0.21 4
rs1800861
RET
0.882 0.160 10 43118395 synonymous variant G/A;T snv 0.74 3