Disease: Non-Small Cell Lung Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4065
PLAU ; C10orf55
0.851 0.080 10 73916706 3 prime UTR variant C/T snv 0.51 4
rs4809957
CYP24A1
0.763 0.240 20 54154632 3 prime UTR variant A/G snv 0.29 10
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55
rs884225
EGFR
0.827 0.160 7 55206391 3 prime UTR variant T/C;G snv 5
rs1800975
XPA
0.701 0.360 9 97697296 5 prime UTR variant T/C;G snv 0.63; 4.5E-06; 4.5E-06 19
rs189037
ATM ; NPAT
0.689 0.400 11 108223106 5 prime UTR variant G/A snv 0.49 22
rs712829
LOC105375284 ; EGFR
0.776 0.120 7 55019062 5 prime UTR variant G/C;T snv 8
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs967591
CD3EAP ; PPP1R13L
0.851 0.080 19 45406676 5 prime UTR variant G/A;C;T snv 0.22; 6.7E-06 4
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs1143634
IL1B
0.597 0.680 2 112832813 synonymous variant G/A snv 0.19 0.19 52
rs11540478
IDH2
0.851 0.080 15 90085305 synonymous variant G/A;C snv 3.5E-02; 6.4E-06 4
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62
rs1948
CHRNB4
0.827 0.160 15 78625057 synonymous variant A/G;T snv 0.69 5
rs2241766
ADIPOQ ; ADIPOQ-AS1
0.608 0.720 3 186853103 synonymous variant T/C;G snv 8.0E-06; 0.13 48
rs2293347
EGFR
0.851 0.080 7 55201223 synonymous variant C/T snv 0.14 9.5E-02 4
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs6068816
CYP24A1
0.752 0.200 20 54164552 synonymous variant C/T snv 0.12 8.9E-02 12
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81
rs8040868
CHRNA3
0.742 0.240 15 78618839 synonymous variant T/C snv 0.35 0.37 17
rs12976445
SPACA6 ; SPACA6P-AS ; MIRLET7E ; MIR125A
0.689 0.600 19 51693200 non coding transcript exon variant T/C snv 0.45 20
rs217727
MRPL23 ; HOTS ; H19
0.641 0.480 11 1995678 non coding transcript exon variant G/A snv 0.20 34
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs2645429
FDFT1 ; LOC105379243
0.790 0.120 8 11802542 non coding transcript exon variant A/G;T snv 7