DisGeNET - a database of gene-disease associations

List of shared variants

Impaired glucose tolerance, C0271650

Disease: Diabetes Mellitus, Non-Insulin-Dependent

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs11061946	ADIPOR2	1.000	0.080	12	1719361	intron variant	C/T	snv		6.8E-02	2
rs11061973	ADIPOR2	1.000	0.080	12	1756770	intron variant	G/A	snv		0.12	2
rs13283456	PTGES2	0.925	0.080	9	128122474	missense variant	C/A;T	snv	4.0E-06; 0.13		3
rs137852787	PDX1	0.882	0.080	13	27924519	missense variant	G/A	snv	1.3E-03	2.0E-04	5
rs17446593		1.000	0.080	13	40553948	intron variant	A/G	snv		0.19	2
rs1884614	LOC105372629	0.882	0.080	20	44351879	non coding transcript exon variant	C/T	snv		0.18	5
rs2073162	TNMD	1.000	0.080	X	100594020	synonymous variant	G/A	snv	0.40	0.39	2
rs2233580	PAX4	0.882	0.080	7	127613496	missense variant	C/T	snv	8.2E-03	2.1E-03	5
rs2278426	ANGPTL8 ; DOCK6	1.000	0.080	19	11239812	missense variant	C/T	snv	0.11	0.11	11
rs3731201	CDKN2A	1.000	0.080	9	21988897	intron variant	C/T	snv		0.86	2
rs495490	CDKN2B-AS1 ; CDKN2B	1.000	0.080	9	22010413	intron variant	A/G	snv		6.8E-02	2
rs945508	ARHGEF11 ; MIR765 ; LRRC71	1.000	0.080	1	156937289	missense variant	T/C	snv	0.64	0.66	3
rs2293855	MTMR9	0.851	0.120	8	11319901	non coding transcript exon variant	G/A	snv		0.35	5
rs2297627	FOXO1	0.925	0.120	13	40659794	intron variant	A/G	snv		0.41	3
rs560887	SPC25 ; G6PC2	0.827	0.120	2	168906638	intron variant	T/C	snv	0.79	0.80	18
rs1169288	HNF1A-AS1 ; HNF1A	0.776	0.160	12	120978847	missense variant	A/C;T	snv	0.35		21
rs121909244	PPARG	0.776	0.160	3	12434111	missense variant	C/A;T	snv	4.0E-06		11
rs1799999	PPP1R3A	0.882	0.160	7	113878379	missense variant	C/A	snv	0.22	0.17	4
rs1801483	GCGR	0.851	0.160	17	81809839	missense variant	G/A	snv	7.4E-03	6.3E-03	7
rs2721068	FOXO1	0.882	0.160	13	40565575	intron variant	T/C	snv		0.38	4
rs744373		0.851	0.160	2	127137039	downstream gene variant	A/G	snv		0.35	8
rs997509	ENPP1	0.827	0.200	6	131846837	intron variant	C/T	snv		5.3E-02	6
rs1181860747	INSR	0.776	0.240	19	7122961	missense variant	C/T	snv			10
rs17446614	FOXO1	0.851	0.240	13	40565740	intron variant	G/A	snv		0.16	5
rs3813929	HTR2C	0.851	0.240	X	114584047	upstream gene variant	C/G;T	snv			5