Disease: Adult Liver Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1046282
ERCC1 ; CD3EAP ; PPP1R13L
0.776 0.160 19 45407414 3 prime UTR variant A/G snv 0.30 10
rs3212948
ERCC1
0.776 0.160 19 45421104 intron variant G/C snv 0.53 10
rs735482
CD3EAP ; ERCC1
0.742 0.160 19 45408744 missense variant A/C snv 0.21 0.20 16
rs769031989
STAT3
0.851 0.160 17 42322464 missense variant T/A snv 7.0E-06 4
rs843706
ACYP2 ; TSPYL6
0.807 0.160 2 54253232 3 prime UTR variant C/A snv 0.42 6
rs6713088
ACYP2
0.763 0.200 2 54118332 intron variant C/G snv 0.48 9
rs843711
ACYP2
0.790 0.200 2 54251980 intron variant C/T snv 0.41 7
rs937283
MDM2
0.716 0.200 12 68808384 5 prime UTR variant A/G snv 0.37 19
rs1682111
ACYP2
0.742 0.240 2 54200842 intron variant A/T snv 0.56 13
rs2296651
SLC10A1
0.732 0.240 14 69778476 missense variant G/A snv 6.3E-03 2.5E-03 13
rs3734091
XRCC4
0.689 0.280 5 83204915 missense variant G/T snv 2.3E-02 1.4E-02 19
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs843720
ACYP2 ; LOC105374610
0.752 0.280 2 54283523 intron variant T/G snv 0.52 10
rs187115
CD44
0.695 0.320 11 35154612 intron variant T/C snv 0.37 22
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs28929474
SERPINA1
0.708 0.320 14 94378610 missense variant C/G;T snv 2.8E-05; 1.1E-02 37
rs121912666
TP53
0.645 0.360 17 7674872 missense variant T/C;G snv 8.0E-06 34
rs28934571
TP53
0.645 0.360 17 7674216 missense variant C/A;G snv 31
rs4444903
EGF
0.630 0.360 4 109912954 5 prime UTR variant A/G snv 0.51 35
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs20576
TNFRSF10A
0.637 0.400 8 23200707 missense variant T/G snv 0.15 0.14 34
rs28934575
TP53
0.641 0.400 17 7674230 missense variant C/A;G;T snv 37
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16 17