DisGeNET - a database of gene-disease associations

List of shared variants

High density lipoprotein measurement, C0392885

Disease: Diabetic Nephropathy

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs429358	APOE	0.590	0.600	19	44908684	missense variant	T/C	snv	0.14	0.16	66
rs7412	APOE	0.641	0.640	19	44908822	missense variant	C/T	snv	6.2E-02	7.9E-02	47
rs4420638	APOC1	0.708	0.520	19	44919689	downstream gene variant	A/G	snv		0.18	43
rs1800775	CETP	0.790	0.240	16	56961324	upstream gene variant	C/A;G	snv	0.51; 5.7E-06		18
rs1532624	CETP	0.851	0.160	16	56971567	intron variant	C/A	snv		0.34	12
rs11643718	SLC12A3	0.807	0.240	16	56899607	missense variant	G/A	snv	0.11	8.4E-02	10
rs7679	PCIF1	0.925	0.160	20	45947863	3 prime UTR variant	T/C	snv		0.13	9
rs4783961	CETP	0.851	0.320	16	56960982	upstream gene variant	G/A	snv	0.48	0.47	7