Disease: Fatty Liver
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs738409
PNPLA3
0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 88
rs12979860
IFNL4
0.547 0.520 19 39248147 intron variant C/T snv 0.39 84
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs8099917 0.581 0.600 19 39252525 upstream gene variant T/G snv 0.16 60
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs1800206
PPARA
0.641 0.640 22 46218377 missense variant C/G snv 4.3E-02 4.2E-02 35
rs12980275 0.701 0.360 19 39241143 upstream gene variant A/G snv 0.36 23
rs641738
LOC112268246 ; TMC4 ; MBOAT7
0.689 0.320 19 54173068 missense variant T/A;C;G snv 22
rs13361189 0.752 0.240 5 150843825 upstream gene variant T/C snv 0.21 13
rs2228603
NCAN
0.790 0.360 19 19219115 missense variant C/A;T snv 2.8E-05; 5.9E-02 12
rs2854116
APOC3
0.807 0.200 11 116829453 upstream gene variant C/T snv 0.51 7
rs626283
TMC4 ; MBOAT7 ; LOC112268246
0.827 0.160 19 54173307 upstream gene variant C/G snv 0.61 7
rs4240624
LOC157273
0.882 0.040 8 9326721 intron variant G/A snv 0.87 5
rs56225452
SLC27A5 ; LOC105372486 ; ZBTB45
0.851 0.080 19 58513279 upstream gene variant C/T snv 0.18 5
rs12137855
LYPLAL1
0.882 0.040 1 219275036 downstream gene variant C/T snv 0.19 3
rs74315468
ARSA
0.882 0.040 22 50626841 missense variant G/A snv 4.0E-06 2.8E-05 3