Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs1047891
CPS1
0.827 0.200 2 210675783 missense variant C/A snv 0.30 0.33 34
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33
rs11066280
HECTD4
0.742 0.280 12 112379979 intron variant T/A snv 7.0E-03 27
rs599839
PSRC1
0.724 0.360 1 109279544 downstream gene variant G/A;C snv 27
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25
rs1535
FADS2
0.752 0.240 11 61830500 intron variant A/G snv 0.31 24
rs693
APOB
0.708 0.440 2 21009323 synonymous variant G/A snv 0.39 0.38 24
rs708272
CETP
0.708 0.440 16 56962376 intron variant G/A snv 0.42 0.38 24
rs174537
TMEM258 ; MYRF
0.708 0.400 11 61785208 non coding transcript exon variant G/T snv 0.28 23
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 22
rs2074755
BAZ1B
0.807 0.240 7 73462836 non coding transcript exon variant T/C snv 9.2E-02 20
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 20
rs261332
ALDH1A2 ; LIPC-AS1 ; LIPC
0.851 0.120 15 58435126 non coding transcript exon variant A/G snv 0.80 20
rs1728918 0.827 0.160 2 27412596 upstream gene variant A/G;T snv 19
rs174535
MYRF ; TMEM258
0.776 0.280 11 61783884 missense variant T/A;C;G snv 0.38 0.32 19
rs2266788
APOA5 ; ZPR1
0.763 0.440 11 116789970 3 prime UTR variant G/A snv 0.93 19
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 19
rs102275
TMEM258
0.827 0.320 11 61790331 non coding transcript exon variant T/C snv 0.47 18
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 18
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs174548
FADS2 ; FADS1
0.851 0.160 11 61803876 5 prime UTR variant C/G;T snv 17
rs799165 0.851 0.120 7 73637727 intergenic variant T/A snv 0.13 17