DisGeNET - a database of gene-disease associations

List of associated variants

Metabolic Syndrome X, C0524620

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs9987289	LOC157273	1.000	0.040	8	9325848	non coding transcript exon variant	A/G	snv		0.87	8
rs10096633		1.000	0.040	8	19973410	regulatory region variant	C/T	snv		0.22	7
rs12286037	ZPR1	1.000	0.040	11	116781491	intron variant	C/T	snv		0.11	6
rs17410962		1.000	0.040	8	19990569	intergenic variant	G/A	snv		0.15	6
rs711752	CETP	1.000	0.040	16	56962299	splice region variant	G/A;C	snv			6
rs9939224	CETP	1.000	0.040	16	56968820	intron variant	T/G	snv		0.75	6
rs11820589	BUD13	1.000	0.040	11	116763146	missense variant	G/A	snv	7.8E-02	0.10	5
rs11986942		1.000	0.040	8	20009934	intergenic variant	C/G;T	snv			4
rs17489282		1.000	0.040	8	19995007	regulatory region variant	C/T	snv		0.25	4
rs1919484		1.000	0.040	8	20012165	intergenic variant	G/A	snv		0.23	4
rs481843	LINC02702	1.000	0.040	11	116655150	non coding transcript exon variant	C/T	snv		8.8E-02	4
rs6494005	ALDH1A2 ; LIPC	1.000	0.040	15	58432325	non coding transcript exon variant	A/G	snv		0.38	4
rs12686004	ABCA1	1.000	0.040	9	104891145	intron variant	G/A	snv		9.1E-02	3
rs16940212	ALDH1A2	1.000	0.040	15	58401821	intron variant	G/A;T	snv			3
rs17863787	UGT1A9 ; UGT1A8 ; UGT1A6 ; UGT1A7 ; UGT1A10	0.925	0.040	2	233702448	intron variant	T/G	snv		0.30	3
rs263	LPL	1.000	0.040	8	19955301	intron variant	C/T	snv		0.23	3
rs271	LPL	1.000	0.040	8	19956191	intron variant	G/A;T	snv			3
rs2741027		1.000	0.040	2	233609365	downstream gene variant	G/A	snv		0.22	3
rs486394	LINC02702	1.000	0.040	11	116655605	intron variant	A/C;T	snv			3
rs7013777		1.000	0.040	8	20020845	intergenic variant	T/C;G	snv			3
rs7461115		1.000	0.040	8	20014029	intergenic variant	C/A;G	snv		0.37	3
rs7575840		1.000	0.040	2	21050618	intergenic variant	G/T	snv		0.26	3
rs929596	UGT1A5 ; UGT1A4 ; UGT1A9 ; UGT1A10 ; UGT1A8 ; UGT1A7 ; UGT1A6 ; UGT1A3 ; UGT1A1	0.925	0.040	2	233765830	intron variant	A/G	snv		0.32	3
rs11216126		1.000	0.040	11	116746524	downstream gene variant	A/C	snv		0.11	2
rs11600380		1.000	0.040	11	116799466	intergenic variant	T/C	snv		6.6E-02	2