Disease: Prostate carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs351855
FGFR4
0.597 0.560 5 177093242 missense variant G/A snv 0.33 0.26 58
rs7726159
TERT
0.790 0.160 5 1282204 intron variant C/A snv 0.29 10
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs2740574
CYP3A4
0.807 0.360 7 99784473 upstream gene variant C/T snv 0.78 12
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs776746
CYP3A5 ; ZSCAN25
0.724 0.400 7 99672916 splice acceptor variant T/C snv 0.72 21
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs77375493
INSL6 ; JAK2
0.458 0.760 9 5073770 missense variant G/A;T snv 3.5E-04 187
rs12255372
TCF7L2
0.667 0.480 10 113049143 intron variant G/A;T snv 28
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 188
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 39
rs4938723
MIR34C ; BTG4 ; MIR34B ; LOC728196
0.574 0.680 11 111511840 intron variant T/C snv 0.32 60
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs2066827
GPR19 ; CDKN1B
0.695 0.320 12 12718165 missense variant T/A;C;G snv 1.6E-04; 1.6E-05; 0.26 21
rs2279744
MDM2
0.605 0.640 12 68808800 intron variant T/G snv 0.31 48
rs4919743
KRT8
0.925 0.080 12 52915800 intron variant G/A snv 0.13 5
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36