Disease: Stomach Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1529916
USP7
0.851 0.120 16 8897333 intron variant G/A snv 0.26 4
rs1870134
XPC ; LSM3
0.827 0.120 3 14178523 missense variant G/C;T snv 4.2E-02; 8.1E-06 5
rs5746136
SOD2
0.807 0.200 6 159682052 3 prime UTR variant C/T snv 0.27 6
rs125701
OGG1
0.790 0.160 3 9748794 upstream gene variant G/A snv 0.13 7
rs1016343
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 8
rs16901946
PCAT1 ; CASC19 ; PRNCR1
0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 8
rs689470
PTGS2
0.776 0.240 1 186671926 3 prime UTR variant G/A;C;T snv 9
rs1380576
MDM4
0.763 0.240 1 204519150 intron variant G/C snv 0.57 10
rs822395
ADIPOQ
0.776 0.240 3 186849018 intron variant C/A;G snv 10
rs5742612
LOC105369944 ; IGF1
0.752 0.440 12 102481086 intron variant A/G snv 5.6E-02 11
rs6218
LINC02456 ; HELLPAR ; IGF1
0.732 0.440 12 102399855 3 prime UTR variant A/G snv 2.1E-02 13
rs2854746
IGFBP3
0.752 0.200 7 45921046 missense variant G/A;C;T snv 0.38 14
rs1569686
DNMT3B
0.752 0.400 20 32779273 intron variant G/A;C;T snv 15
rs1131445
IL16 ; STARD5
0.724 0.440 15 81309441 3 prime UTR variant T/A;C snv 16
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16
rs1057941
GBAP1
0.701 0.280 1 155216951 non coding transcript exon variant G/A;T snv 0.46 18
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs1047840
EXO1
0.708 0.280 1 241878999 missense variant G/A snv 0.36 0.40 19
rs16260
CDH1
0.716 0.440 16 68737131 upstream gene variant C/A snv 0.24 19
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27 19
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs4143815
CD274
0.689 0.400 9 5468257 3 prime UTR variant G/C snv 0.23 20
rs2296147
BIVM-ERCC5 ; ERCC5
0.695 0.280 13 102846025 5 prime UTR variant T/C snv 0.38 21
rs4245739
MDM4
0.708 0.360 1 204549714 3 prime UTR variant C/A;G snv 0.77; 6.2E-06 21